Gene : evm_27.TU.AmTr_v1.0_scaffold00030.78 A. trichopoda v1.0
Defline:  (1 of 1) PTHR22849//PTHR22849:SF20 - WDSAM1 PROTEIN Genomic Order:  77
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00030.78 Secondary Identifier:  ? PAC:31556606
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-7511 Amborella trichopoda pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00030.78 0.5kb upstream 0.5kb upstream 1718 true AmTr_v1.0_scaffold00030: 1792075-1793792 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00030.78 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00030: 1793293-1793792 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00030.78 0.5kb downstream 0.5kb downstream 1718 true AmTr_v1.0_scaffold00030: 1791575-1793292 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00030.78 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00030: 1791575-1792074 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00030.78 1.0kb upstream 1.0kb upstream 2218 true AmTr_v1.0_scaffold00030: 1792075-1794292 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00030.78 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00030: 1793293-1794292 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00030.78 1.0kb downstream 1.0kb downstream 2218 true AmTr_v1.0_scaffold00030: 1791075-1793292 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00030.78 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00030: 1791075-1792074 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00030.78 2.0kb upstream 2.0kb upstream 3218 true AmTr_v1.0_scaffold00030: 1792075-1795292 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00030.78 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00030: 1793293-1795292 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00030.78 2.0kb downstream 2.0kb downstream 3218 true AmTr_v1.0_scaffold00030: 1790075-1793292 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00030.78 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00030: 1790075-1792074 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00030.78 5.0kb upstream 5.0kb upstream 6218 true AmTr_v1.0_scaffold00030: 1792075-1798292 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00030.78 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00030: 1793293-1798292 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00030.78 5.0kb downstream 5.0kb downstream 6218 true AmTr_v1.0_scaffold00030: 1787075-1793292 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00030.78 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00030: 1787075-1792074 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00030.78 10.0kb upstream 10.0kb upstream 11218 true AmTr_v1.0_scaffold00030: 1792075-1803292 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00030.78 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00030: 1793293-1803292 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00030.78 10.0kb downstream 10.0kb downstream 11218 true AmTr_v1.0_scaffold00030: 1782075-1793292 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00030.78 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00030: 1782075-1792074 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041845 5273 Angiosperm View MSA
121351063 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain