Gene : evm_27.TU.AmTr_v1.0_scaffold00030.38 A. trichopoda v1.0
Defline:  (1 of 1) PTHR13110 - U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM3 Genomic Order:  37
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00030.38 Secondary Identifier:  ? PAC:31556557
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00030.38 0.5kb upstream 0.5kb upstream 23128 true AmTr_v1.0_scaffold00030: 1050055-1073182 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00030.38 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00030: 1050055-1050554 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00030.38 0.5kb downstream 0.5kb downstream 23128 true AmTr_v1.0_scaffold00030: 1050555-1073682 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00030.38 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00030: 1073183-1073682 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00030.38 1.0kb upstream 1.0kb upstream 23628 true AmTr_v1.0_scaffold00030: 1049555-1073182 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00030.38 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00030: 1049555-1050554 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00030.38 1.0kb downstream 1.0kb downstream 23628 true AmTr_v1.0_scaffold00030: 1050555-1074182 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00030.38 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00030: 1073183-1074182 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00030.38 2.0kb upstream 2.0kb upstream 24628 true AmTr_v1.0_scaffold00030: 1048555-1073182 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00030.38 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00030: 1048555-1050554 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00030.38 2.0kb downstream 2.0kb downstream 24628 true AmTr_v1.0_scaffold00030: 1050555-1075182 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00030.38 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00030: 1073183-1075182 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00030.38 5.0kb upstream 5.0kb upstream 27628 true AmTr_v1.0_scaffold00030: 1045555-1073182 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00030.38 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00030: 1045555-1050554 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00030.38 5.0kb downstream 5.0kb downstream 27628 true AmTr_v1.0_scaffold00030: 1050555-1078182 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00030.38 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00030: 1073183-1078182 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00030.38 10.0kb upstream 10.0kb upstream 32628 true AmTr_v1.0_scaffold00030: 1040555-1073182 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00030.38 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00030: 1040555-1050554 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00030.38 10.0kb downstream 10.0kb downstream 32628 true AmTr_v1.0_scaffold00030: 1050555-1083182 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00030.38 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00030: 1073183-1083182 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122047292 5273 Angiosperm View MSA
121345719 5274 Embryophyte View MSA
123424413 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain