Gene : evm_27.TU.AmTr_v1.0_scaffold00030.227 A. trichopoda v1.0
Defline:  (1 of 5) PTHR23088//PTHR23088:SF31 - NITRILASE-RELATED Genomic Order:  223
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00030.227 Secondary Identifier:  ? PAC:31556546
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda ASPARAGINE-DEG1-PWY Amborella trichopoda pathologic  
Atrichopoda ASPSYNII-PWY Amborella trichopoda pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00030.227 0.5kb upstream 0.5kb upstream 17667 true AmTr_v1.0_scaffold00030: 6042967-6060633 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00030.227 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00030: 6042967-6043466 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00030.227 0.5kb downstream 0.5kb downstream 17667 true AmTr_v1.0_scaffold00030: 6043467-6061133 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00030.227 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00030: 6060634-6061133 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00030.227 1.0kb upstream 1.0kb upstream 18167 true AmTr_v1.0_scaffold00030: 6042467-6060633 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00030.227 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00030: 6042467-6043466 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00030.227 1.0kb downstream 1.0kb downstream 18167 true AmTr_v1.0_scaffold00030: 6043467-6061633 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00030.227 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00030: 6060634-6061633 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00030.227 2.0kb upstream 2.0kb upstream 19167 true AmTr_v1.0_scaffold00030: 6041467-6060633 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00030.227 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00030: 6041467-6043466 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00030.227 2.0kb downstream 2.0kb downstream 19167 true AmTr_v1.0_scaffold00030: 6043467-6062633 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00030.227 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00030: 6060634-6062633 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00030.227 5.0kb upstream 5.0kb upstream 22167 true AmTr_v1.0_scaffold00030: 6038467-6060633 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00030.227 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00030: 6038467-6043466 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00030.227 5.0kb downstream 5.0kb downstream 22167 true AmTr_v1.0_scaffold00030: 6043467-6065633 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00030.227 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00030: 6060634-6065633 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00030.227 10.0kb upstream 10.0kb upstream 27167 true AmTr_v1.0_scaffold00030: 6033467-6060633 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00030.227 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00030: 6033467-6043466 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00030.227 10.0kb downstream 10.0kb downstream 27167 true AmTr_v1.0_scaffold00030: 6043467-6070633 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00030.227 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00030: 6060634-6070633 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122043736 5273 Angiosperm View MSA
121347314 5274 Embryophyte View MSA
123380526 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain