Gene : evm_27.TU.AmTr_v1.0_scaffold00029.438 A. trichopoda v1.0
Defline:  (1 of 1) PTHR11071//PTHR11071:SF291 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE Genomic Order:  437
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00029.438 Secondary Identifier:  ? PAC:31549753
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00029.438 0.5kb upstream 0.5kb upstream 10816 true AmTr_v1.0_scaffold00029: 5957492-5968307 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.438 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00029: 5967808-5968307 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.438 0.5kb downstream 0.5kb downstream 10816 true AmTr_v1.0_scaffold00029: 5956992-5967807 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.438 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00029: 5956992-5957491 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.438 1.0kb upstream 1.0kb upstream 11316 true AmTr_v1.0_scaffold00029: 5957492-5968807 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.438 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00029: 5967808-5968807 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.438 1.0kb downstream 1.0kb downstream 11316 true AmTr_v1.0_scaffold00029: 5956492-5967807 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.438 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00029: 5956492-5957491 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.438 2.0kb upstream 2.0kb upstream 12316 true AmTr_v1.0_scaffold00029: 5957492-5969807 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.438 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00029: 5967808-5969807 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.438 2.0kb downstream 2.0kb downstream 12316 true AmTr_v1.0_scaffold00029: 5955492-5967807 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.438 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00029: 5955492-5957491 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.438 5.0kb upstream 5.0kb upstream 15316 true AmTr_v1.0_scaffold00029: 5957492-5972807 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.438 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00029: 5967808-5972807 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.438 5.0kb downstream 5.0kb downstream 15316 true AmTr_v1.0_scaffold00029: 5952492-5967807 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.438 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00029: 5952492-5957491 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.438 10.0kb upstream 10.0kb upstream 20316 true AmTr_v1.0_scaffold00029: 5957492-5977807 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.438 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00029: 5967808-5977807 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.438 10.0kb downstream 10.0kb downstream 20316 true AmTr_v1.0_scaffold00029: 5947492-5967807 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00029.438 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00029: 5947492-5957491 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041792 5273 Angiosperm View MSA
123428973 5275 Viridiplantae View MSA
121346769 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain