Gene : evm_27.TU.AmTr_v1.0_scaffold00034.86 A. trichopoda v1.0
Defline:  (1 of 3) PTHR12181:SF12 - PROTEIN LPIN-1 Genomic Order:  83
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00034.86 Secondary Identifier:  ? PAC:31549519
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda TRIGLSYN-PWY Amborella trichopoda pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00034.86 0.5kb upstream 0.5kb upstream 34830 true AmTr_v1.0_scaffold00034: 4232325-4267154 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00034.86 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00034: 4232325-4232824 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00034.86 0.5kb downstream 0.5kb downstream 34830 true AmTr_v1.0_scaffold00034: 4232825-4267654 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00034.86 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00034: 4267155-4267654 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00034.86 1.0kb upstream 1.0kb upstream 35330 true AmTr_v1.0_scaffold00034: 4231825-4267154 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00034.86 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00034: 4231825-4232824 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00034.86 1.0kb downstream 1.0kb downstream 35330 true AmTr_v1.0_scaffold00034: 4232825-4268154 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00034.86 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00034: 4267155-4268154 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00034.86 2.0kb upstream 2.0kb upstream 36330 true AmTr_v1.0_scaffold00034: 4230825-4267154 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00034.86 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00034: 4230825-4232824 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00034.86 2.0kb downstream 2.0kb downstream 36330 true AmTr_v1.0_scaffold00034: 4232825-4269154 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00034.86 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00034: 4267155-4269154 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00034.86 5.0kb upstream 5.0kb upstream 39330 true AmTr_v1.0_scaffold00034: 4227825-4267154 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00034.86 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00034: 4227825-4232824 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00034.86 5.0kb downstream 5.0kb downstream 39330 true AmTr_v1.0_scaffold00034: 4232825-4272154 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00034.86 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00034: 4267155-4272154 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00034.86 10.0kb upstream 10.0kb upstream 44330 true AmTr_v1.0_scaffold00034: 4222825-4267154 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00034.86 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00034: 4222825-4232824 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00034.86 10.0kb downstream 10.0kb downstream 44330 true AmTr_v1.0_scaffold00034: 4232825-4277154 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00034.86 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00034: 4267155-4277154 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122048354 5273 Angiosperm View MSA
121350822 5274 Embryophyte View MSA
123381897 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain