Gene : evm_27.TU.AmTr_v1.0_scaffold00033.27 A. trichopoda v1.0
Defline:  (1 of 1) 1.1.1.316 - L-galactose 1-dehydrogenase / L-galDH Genomic Order:  26
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00033.27 Secondary Identifier:  ? PAC:31561696
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-882 Amborella trichopoda pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00033.27 0.5kb upstream 0.5kb upstream 5714 true AmTr_v1.0_scaffold00033: 657090-662803 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.27 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00033: 662304-662803 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.27 0.5kb downstream 0.5kb downstream 5714 true AmTr_v1.0_scaffold00033: 656590-662303 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.27 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00033: 656590-657089 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.27 1.0kb upstream 1.0kb upstream 6214 true AmTr_v1.0_scaffold00033: 657090-663303 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.27 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00033: 662304-663303 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.27 1.0kb downstream 1.0kb downstream 6214 true AmTr_v1.0_scaffold00033: 656090-662303 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.27 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00033: 656090-657089 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.27 2.0kb upstream 2.0kb upstream 7214 true AmTr_v1.0_scaffold00033: 657090-664303 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.27 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00033: 662304-664303 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.27 2.0kb downstream 2.0kb downstream 7214 true AmTr_v1.0_scaffold00033: 655090-662303 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.27 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00033: 655090-657089 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.27 5.0kb upstream 5.0kb upstream 10214 true AmTr_v1.0_scaffold00033: 657090-667303 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.27 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00033: 662304-667303 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.27 5.0kb downstream 5.0kb downstream 10214 true AmTr_v1.0_scaffold00033: 652090-662303 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.27 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00033: 652090-657089 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.27 10.0kb upstream 10.0kb upstream 15214 true AmTr_v1.0_scaffold00033: 657090-672303 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.27 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00033: 662304-672303 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.27 10.0kb downstream 10.0kb downstream 15214 true AmTr_v1.0_scaffold00033: 647090-662303 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.27 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00033: 647090-657089 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122044001 5273 Angiosperm View MSA
121345751 5274 Embryophyte View MSA
123427214 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain