Gene : evm_27.TU.AmTr_v1.0_scaffold00033.39 A. trichopoda v1.0
Defline:  (1 of 1) PTHR12599:SF2 - PCD/DCOH-LIKE PROTEIN 2 Genomic Order:  38
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00033.39 Secondary Identifier:  ? PAC:31561837
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00033.39 0.5kb upstream 0.5kb upstream 19655 true AmTr_v1.0_scaffold00033: 1098091-1117745 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.39 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00033: 1117246-1117745 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.39 0.5kb downstream 0.5kb downstream 19655 true AmTr_v1.0_scaffold00033: 1097591-1117245 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.39 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00033: 1097591-1098090 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.39 1.0kb upstream 1.0kb upstream 20155 true AmTr_v1.0_scaffold00033: 1098091-1118245 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.39 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00033: 1117246-1118245 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.39 1.0kb downstream 1.0kb downstream 20155 true AmTr_v1.0_scaffold00033: 1097091-1117245 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.39 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00033: 1097091-1098090 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.39 2.0kb upstream 2.0kb upstream 21155 true AmTr_v1.0_scaffold00033: 1098091-1119245 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.39 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00033: 1117246-1119245 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.39 2.0kb downstream 2.0kb downstream 21155 true AmTr_v1.0_scaffold00033: 1096091-1117245 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.39 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00033: 1096091-1098090 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.39 5.0kb upstream 5.0kb upstream 24155 true AmTr_v1.0_scaffold00033: 1098091-1122245 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.39 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00033: 1117246-1122245 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.39 5.0kb downstream 5.0kb downstream 24155 true AmTr_v1.0_scaffold00033: 1093091-1117245 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.39 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00033: 1093091-1098090 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.39 10.0kb upstream 10.0kb upstream 29155 true AmTr_v1.0_scaffold00033: 1098091-1127245 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.39 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00033: 1117246-1127245 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.39 10.0kb downstream 10.0kb downstream 29155 true AmTr_v1.0_scaffold00033: 1088091-1117245 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.39 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00033: 1088091-1098090 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122046446 5273 Angiosperm View MSA
121348467 5274 Embryophyte View MSA
123427509 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain