Gene : evm_27.TU.AmTr_v1.0_scaffold00033.129 A. trichopoda v1.0
Defline:  (1 of 1) PTHR12948 - NEDD8 ULTIMATE BUSTER-1 BS4 PROTEIN Genomic Order:  128
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00033.129 Secondary Identifier:  ? PAC:31561886
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00033.129 0.5kb upstream 0.5kb upstream 8435 true AmTr_v1.0_scaffold00033: 2943878-2952312 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.129 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00033: 2943878-2944377 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.129 0.5kb downstream 0.5kb downstream 8435 true AmTr_v1.0_scaffold00033: 2944378-2952812 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.129 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00033: 2952313-2952812 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.129 1.0kb upstream 1.0kb upstream 8935 true AmTr_v1.0_scaffold00033: 2943378-2952312 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.129 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00033: 2943378-2944377 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.129 1.0kb downstream 1.0kb downstream 8935 true AmTr_v1.0_scaffold00033: 2944378-2953312 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.129 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00033: 2952313-2953312 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.129 2.0kb upstream 2.0kb upstream 9935 true AmTr_v1.0_scaffold00033: 2942378-2952312 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.129 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00033: 2942378-2944377 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.129 2.0kb downstream 2.0kb downstream 9935 true AmTr_v1.0_scaffold00033: 2944378-2954312 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.129 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00033: 2952313-2954312 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.129 5.0kb upstream 5.0kb upstream 12935 true AmTr_v1.0_scaffold00033: 2939378-2952312 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.129 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00033: 2939378-2944377 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.129 5.0kb downstream 5.0kb downstream 12935 true AmTr_v1.0_scaffold00033: 2944378-2957312 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.129 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00033: 2952313-2957312 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.129 10.0kb upstream 10.0kb upstream 17935 true AmTr_v1.0_scaffold00033: 2934378-2952312 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.129 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00033: 2934378-2944377 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.129 10.0kb downstream 10.0kb downstream 17935 true AmTr_v1.0_scaffold00033: 2944378-2962312 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.129 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00033: 2952313-2962312 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122046197 5273 Angiosperm View MSA
123429148 5275 Viridiplantae View MSA
121344011 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain