Gene : evm_27.TU.AmTr_v1.0_scaffold00033.190 A. trichopoda v1.0
Defline:  (1 of 1) KOG3117 - Protein involved in rRNA processing Genomic Order:  188
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00033.190 Secondary Identifier:  ? PAC:31561864
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00033.190 0.5kb upstream 0.5kb upstream 3291 true AmTr_v1.0_scaffold00033: 4281359-4284649 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.190 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00033: 4281359-4281858 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.190 0.5kb downstream 0.5kb downstream 3291 true AmTr_v1.0_scaffold00033: 4281859-4285149 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.190 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00033: 4284650-4285149 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.190 1.0kb upstream 1.0kb upstream 3791 true AmTr_v1.0_scaffold00033: 4280859-4284649 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.190 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00033: 4280859-4281858 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.190 1.0kb downstream 1.0kb downstream 3791 true AmTr_v1.0_scaffold00033: 4281859-4285649 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.190 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00033: 4284650-4285649 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.190 2.0kb upstream 2.0kb upstream 4791 true AmTr_v1.0_scaffold00033: 4279859-4284649 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.190 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00033: 4279859-4281858 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.190 2.0kb downstream 2.0kb downstream 4791 true AmTr_v1.0_scaffold00033: 4281859-4286649 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.190 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00033: 4284650-4286649 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.190 5.0kb upstream 5.0kb upstream 7791 true AmTr_v1.0_scaffold00033: 4276859-4284649 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.190 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00033: 4276859-4281858 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.190 5.0kb downstream 5.0kb downstream 7791 true AmTr_v1.0_scaffold00033: 4281859-4289649 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.190 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00033: 4284650-4289649 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.190 10.0kb upstream 10.0kb upstream 12791 true AmTr_v1.0_scaffold00033: 4271859-4284649 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.190 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00033: 4271859-4281858 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.190 10.0kb downstream 10.0kb downstream 12791 true AmTr_v1.0_scaffold00033: 4281859-4294649 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00033.190 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00033: 4284650-4294649 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122047581 5273 Angiosperm View MSA
121345702 5274 Embryophyte View MSA
123380258 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain