Gene : evm_27.TU.AmTr_v1.0_scaffold00038.120 A. trichopoda v1.0
Defline:  (1 of 1) PTHR23160:SF3 - SYNAPTONEMAL COMPLEX PROTEIN 1-RELATED Genomic Order:  119
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00038.120 Secondary Identifier:  ? PAC:31571050
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00038.120 0.5kb upstream 0.5kb upstream 19720 true AmTr_v1.0_scaffold00038: 2964944-2984663 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.120 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00038: 2964944-2965443 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.120 0.5kb downstream 0.5kb downstream 19720 true AmTr_v1.0_scaffold00038: 2965444-2985163 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.120 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00038: 2984664-2985163 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.120 1.0kb upstream 1.0kb upstream 20220 true AmTr_v1.0_scaffold00038: 2964444-2984663 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.120 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00038: 2964444-2965443 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.120 1.0kb downstream 1.0kb downstream 20220 true AmTr_v1.0_scaffold00038: 2965444-2985663 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.120 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00038: 2984664-2985663 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.120 2.0kb upstream 2.0kb upstream 21220 true AmTr_v1.0_scaffold00038: 2963444-2984663 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.120 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00038: 2963444-2965443 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.120 2.0kb downstream 2.0kb downstream 21220 true AmTr_v1.0_scaffold00038: 2965444-2986663 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.120 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00038: 2984664-2986663 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.120 5.0kb upstream 5.0kb upstream 24220 true AmTr_v1.0_scaffold00038: 2960444-2984663 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.120 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00038: 2960444-2965443 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.120 5.0kb downstream 5.0kb downstream 24220 true AmTr_v1.0_scaffold00038: 2965444-2989663 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.120 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00038: 2984664-2989663 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.120 10.0kb upstream 10.0kb upstream 29220 true AmTr_v1.0_scaffold00038: 2955444-2984663 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.120 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00038: 2955444-2965443 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.120 10.0kb downstream 10.0kb downstream 29220 true AmTr_v1.0_scaffold00038: 2965444-2994663 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.120 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00038: 2984664-2994663 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122042808 5273 Angiosperm View MSA
121349481 5274 Embryophyte View MSA
123381327 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain