Gene : evm_27.TU.AmTr_v1.0_scaffold00038.112 A. trichopoda v1.0
Defline:  (1 of 1) PTHR12459:SF6 - TRANSMEMBRANE PROTEIN Genomic Order:  111
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00038.112 Secondary Identifier:  ? PAC:31570878
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00038.112 0.5kb upstream 0.5kb upstream 18881 true AmTr_v1.0_scaffold00038: 2791160-2810040 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.112 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00038: 2809541-2810040 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.112 0.5kb downstream 0.5kb downstream 18881 true AmTr_v1.0_scaffold00038: 2790660-2809540 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.112 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00038: 2790660-2791159 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.112 1.0kb upstream 1.0kb upstream 19381 true AmTr_v1.0_scaffold00038: 2791160-2810540 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.112 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00038: 2809541-2810540 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.112 1.0kb downstream 1.0kb downstream 19381 true AmTr_v1.0_scaffold00038: 2790160-2809540 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.112 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00038: 2790160-2791159 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.112 2.0kb upstream 2.0kb upstream 20381 true AmTr_v1.0_scaffold00038: 2791160-2811540 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.112 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00038: 2809541-2811540 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.112 2.0kb downstream 2.0kb downstream 20381 true AmTr_v1.0_scaffold00038: 2789160-2809540 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.112 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00038: 2789160-2791159 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.112 5.0kb upstream 5.0kb upstream 23381 true AmTr_v1.0_scaffold00038: 2791160-2814540 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.112 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00038: 2809541-2814540 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.112 5.0kb downstream 5.0kb downstream 23381 true AmTr_v1.0_scaffold00038: 2786160-2809540 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.112 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00038: 2786160-2791159 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.112 10.0kb upstream 10.0kb upstream 28381 true AmTr_v1.0_scaffold00038: 2791160-2819540 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.112 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00038: 2809541-2819540 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.112 10.0kb downstream 10.0kb downstream 28381 true AmTr_v1.0_scaffold00038: 2781160-2809540 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00038.112 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00038: 2781160-2791159 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122042265 5273 Angiosperm View MSA
121346906 5274 Embryophyte View MSA
123424651 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain