Gene : evm_27.TU.AmTr_v1.0_scaffold00037.97 A. trichopoda v1.0
Defline:  (1 of 1) PF02163//PF13180 - Peptidase family M50 (Peptidase_M50) // PDZ domain (PDZ_2) Genomic Order:  94
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00037.97 Secondary Identifier:  ? PAC:31556100
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00037.97 0.5kb upstream 0.5kb upstream 1846 true AmTr_v1.0_scaffold00037: 3429384-3431229 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00037.97 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00037: 3430730-3431229 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00037.97 0.5kb downstream 0.5kb downstream 1846 true AmTr_v1.0_scaffold00037: 3428884-3430729 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00037.97 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00037: 3428884-3429383 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00037.97 1.0kb upstream 1.0kb upstream 2346 true AmTr_v1.0_scaffold00037: 3429384-3431729 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00037.97 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00037: 3430730-3431729 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00037.97 1.0kb downstream 1.0kb downstream 2346 true AmTr_v1.0_scaffold00037: 3428384-3430729 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00037.97 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00037: 3428384-3429383 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00037.97 2.0kb upstream 2.0kb upstream 3346 true AmTr_v1.0_scaffold00037: 3429384-3432729 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00037.97 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00037: 3430730-3432729 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00037.97 2.0kb downstream 2.0kb downstream 3346 true AmTr_v1.0_scaffold00037: 3427384-3430729 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00037.97 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00037: 3427384-3429383 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00037.97 5.0kb upstream 5.0kb upstream 6346 true AmTr_v1.0_scaffold00037: 3429384-3435729 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00037.97 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00037: 3430730-3435729 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00037.97 5.0kb downstream 5.0kb downstream 6346 true AmTr_v1.0_scaffold00037: 3424384-3430729 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00037.97 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00037: 3424384-3429383 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00037.97 10.0kb upstream 10.0kb upstream 11346 true AmTr_v1.0_scaffold00037: 3429384-3440729 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00037.97 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00037: 3430730-3440729 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00037.97 10.0kb downstream 10.0kb downstream 11346 true AmTr_v1.0_scaffold00037: 3419384-3430729 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00037.97 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00037: 3419384-3429383 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122044779 5273 Angiosperm View MSA
121347975 5274 Embryophyte View MSA
123424345 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain