Gene : evm_27.TU.AmTr_v1.0_scaffold00036.50 A. trichopoda v1.0
Defline:  (1 of 2) PTHR31245:SF1 - UBIQUITIN SYSTEM COMPONENT CUE PROTEIN Genomic Order:  48
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00036.50 Secondary Identifier:  ? PAC:31554303
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0 Pathways

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00036.50 0.5kb upstream 0.5kb upstream 13296 true AmTr_v1.0_scaffold00036: 1544775-1558070 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00036.50 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00036: 1557571-1558070 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00036.50 0.5kb downstream 0.5kb downstream 13296 true AmTr_v1.0_scaffold00036: 1544275-1557570 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00036.50 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00036: 1544275-1544774 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00036.50 1.0kb upstream 1.0kb upstream 13796 true AmTr_v1.0_scaffold00036: 1544775-1558570 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00036.50 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00036: 1557571-1558570 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00036.50 1.0kb downstream 1.0kb downstream 13796 true AmTr_v1.0_scaffold00036: 1543775-1557570 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00036.50 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00036: 1543775-1544774 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00036.50 2.0kb upstream 2.0kb upstream 14796 true AmTr_v1.0_scaffold00036: 1544775-1559570 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00036.50 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00036: 1557571-1559570 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00036.50 2.0kb downstream 2.0kb downstream 14796 true AmTr_v1.0_scaffold00036: 1542775-1557570 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00036.50 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00036: 1542775-1544774 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00036.50 5.0kb upstream 5.0kb upstream 17796 true AmTr_v1.0_scaffold00036: 1544775-1562570 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00036.50 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00036: 1557571-1562570 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00036.50 5.0kb downstream 5.0kb downstream 17796 true AmTr_v1.0_scaffold00036: 1539775-1557570 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00036.50 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00036: 1539775-1544774 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00036.50 10.0kb upstream 10.0kb upstream 22796 true AmTr_v1.0_scaffold00036: 1544775-1567570 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00036.50 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00036: 1557571-1567570 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00036.50 10.0kb downstream 10.0kb downstream 22796 true AmTr_v1.0_scaffold00036: 1534775-1557570 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00036.50 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00036: 1534775-1544774 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122042927 5273 Angiosperm View MSA
121343800 5274 Embryophyte View MSA
123427997 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain