Gene : evm_27.TU.AmTr_v1.0_scaffold00036.166 A. trichopoda v1.0
Defline:  (1 of 2) PF00240//PF13423 - Ubiquitin family (ubiquitin) // Ubiquitin carboxyl-terminal hydrolase (UCH_1) Genomic Order:  158
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00036.166 Secondary Identifier:  ? PAC:31554328
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00036.166 0.5kb upstream 0.5kb upstream 31199 true AmTr_v1.0_scaffold00036: 4749296-4780494 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00036.166 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00036: 4779995-4780494 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00036.166 0.5kb downstream 0.5kb downstream 31199 true AmTr_v1.0_scaffold00036: 4748796-4779994 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00036.166 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00036: 4748796-4749295 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00036.166 1.0kb upstream 1.0kb upstream 31699 true AmTr_v1.0_scaffold00036: 4749296-4780994 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00036.166 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00036: 4779995-4780994 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00036.166 1.0kb downstream 1.0kb downstream 31699 true AmTr_v1.0_scaffold00036: 4748296-4779994 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00036.166 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00036: 4748296-4749295 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00036.166 2.0kb upstream 2.0kb upstream 32699 true AmTr_v1.0_scaffold00036: 4749296-4781994 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00036.166 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00036: 4779995-4781994 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00036.166 2.0kb downstream 2.0kb downstream 32699 true AmTr_v1.0_scaffold00036: 4747296-4779994 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00036.166 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00036: 4747296-4749295 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00036.166 5.0kb upstream 5.0kb upstream 35699 true AmTr_v1.0_scaffold00036: 4749296-4784994 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00036.166 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00036: 4779995-4784994 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00036.166 5.0kb downstream 5.0kb downstream 35699 true AmTr_v1.0_scaffold00036: 4744296-4779994 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00036.166 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00036: 4744296-4749295 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00036.166 10.0kb upstream 10.0kb upstream 40699 true AmTr_v1.0_scaffold00036: 4749296-4789994 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00036.166 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00036: 4779995-4789994 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00036.166 10.0kb downstream 10.0kb downstream 40699 true AmTr_v1.0_scaffold00036: 4739296-4779994 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00036.166 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00036: 4739296-4749295 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122042667 5273 Angiosperm View MSA
121345593 5274 Embryophyte View MSA
123424639 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain