Gene : evm_27.TU.AmTr_v1.0_scaffold00040.71 A. trichopoda v1.0
Defline:  (1 of 2) KOG0003 - Ubiquitin/60s ribosomal protein L40 fusion Genomic Order:  71
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00040.71 Secondary Identifier:  ? PAC:31567935
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00040.71 0.5kb upstream 0.5kb upstream 4696 true AmTr_v1.0_scaffold00040: 1279173-1283868 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.71 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00040: 1283369-1283868 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.71 0.5kb downstream 0.5kb downstream 4696 true AmTr_v1.0_scaffold00040: 1278673-1283368 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.71 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00040: 1278673-1279172 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.71 1.0kb upstream 1.0kb upstream 5196 true AmTr_v1.0_scaffold00040: 1279173-1284368 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.71 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00040: 1283369-1284368 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.71 1.0kb downstream 1.0kb downstream 5196 true AmTr_v1.0_scaffold00040: 1278173-1283368 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.71 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00040: 1278173-1279172 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.71 2.0kb upstream 2.0kb upstream 6196 true AmTr_v1.0_scaffold00040: 1279173-1285368 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.71 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00040: 1283369-1285368 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.71 2.0kb downstream 2.0kb downstream 6196 true AmTr_v1.0_scaffold00040: 1277173-1283368 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.71 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00040: 1277173-1279172 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.71 5.0kb upstream 5.0kb upstream 9196 true AmTr_v1.0_scaffold00040: 1279173-1288368 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.71 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00040: 1283369-1288368 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.71 5.0kb downstream 5.0kb downstream 9196 true AmTr_v1.0_scaffold00040: 1274173-1283368 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.71 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00040: 1274173-1279172 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.71 10.0kb upstream 10.0kb upstream 14196 true AmTr_v1.0_scaffold00040: 1279173-1293368 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.71 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00040: 1283369-1293368 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.71 10.0kb downstream 10.0kb downstream 14196 true AmTr_v1.0_scaffold00040: 1269173-1283368 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.71 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00040: 1269173-1279172 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122042303 5273 Angiosperm View MSA
121349234 5274 Embryophyte View MSA
123425972 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain