Gene : evm_27.TU.AmTr_v1.0_scaffold00040.66 A. trichopoda v1.0
Defline:  (1 of 3) PTHR31852:SF7 - LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN Genomic Order:  66
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00040.66 Secondary Identifier:  ? PAC:31567914
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00040.66 0.5kb upstream 0.5kb upstream 1103 true AmTr_v1.0_scaffold00040: 1254747-1255849 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.66 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00040: 1255350-1255849 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.66 0.5kb downstream 0.5kb downstream 1103 true AmTr_v1.0_scaffold00040: 1254247-1255349 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.66 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00040: 1254247-1254746 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.66 1.0kb upstream 1.0kb upstream 1603 true AmTr_v1.0_scaffold00040: 1254747-1256349 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.66 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00040: 1255350-1256349 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.66 1.0kb downstream 1.0kb downstream 1603 true AmTr_v1.0_scaffold00040: 1253747-1255349 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.66 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00040: 1253747-1254746 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.66 2.0kb upstream 2.0kb upstream 2603 true AmTr_v1.0_scaffold00040: 1254747-1257349 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.66 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00040: 1255350-1257349 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.66 2.0kb downstream 2.0kb downstream 2603 true AmTr_v1.0_scaffold00040: 1252747-1255349 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.66 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00040: 1252747-1254746 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.66 5.0kb upstream 5.0kb upstream 5603 true AmTr_v1.0_scaffold00040: 1254747-1260349 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.66 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00040: 1255350-1260349 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.66 5.0kb downstream 5.0kb downstream 5603 true AmTr_v1.0_scaffold00040: 1249747-1255349 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.66 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00040: 1249747-1254746 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.66 10.0kb upstream 10.0kb upstream 10603 true AmTr_v1.0_scaffold00040: 1254747-1265349 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.66 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00040: 1255350-1265349 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.66 10.0kb downstream 10.0kb downstream 10603 true AmTr_v1.0_scaffold00040: 1244747-1255349 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00040.66 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00040: 1244747-1254746 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122047414 5273 Angiosperm View MSA
121346777 5274 Embryophyte View MSA
123380442 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain