Gene : evm_27.TU.AmTr_v1.0_scaffold00044.177 A. trichopoda v1.0
Defline:  (1 of 1) KOG2342 - Uncharacterized conserved protein Genomic Order:  176
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00044.177 Secondary Identifier:  ? PAC:31575497
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00044.177 0.5kb upstream 0.5kb upstream 3182 true AmTr_v1.0_scaffold00044: 2540465-2543646 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.177 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00044: 2543147-2543646 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.177 0.5kb downstream 0.5kb downstream 3182 true AmTr_v1.0_scaffold00044: 2539965-2543146 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.177 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00044: 2539965-2540464 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.177 1.0kb upstream 1.0kb upstream 3682 true AmTr_v1.0_scaffold00044: 2540465-2544146 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.177 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00044: 2543147-2544146 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.177 1.0kb downstream 1.0kb downstream 3682 true AmTr_v1.0_scaffold00044: 2539465-2543146 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.177 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00044: 2539465-2540464 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.177 2.0kb upstream 2.0kb upstream 4682 true AmTr_v1.0_scaffold00044: 2540465-2545146 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.177 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00044: 2543147-2545146 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.177 2.0kb downstream 2.0kb downstream 4682 true AmTr_v1.0_scaffold00044: 2538465-2543146 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.177 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00044: 2538465-2540464 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.177 5.0kb upstream 5.0kb upstream 7682 true AmTr_v1.0_scaffold00044: 2540465-2548146 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.177 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00044: 2543147-2548146 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.177 5.0kb downstream 5.0kb downstream 7682 true AmTr_v1.0_scaffold00044: 2535465-2543146 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.177 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00044: 2535465-2540464 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.177 10.0kb upstream 10.0kb upstream 12682 true AmTr_v1.0_scaffold00044: 2540465-2553146 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.177 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00044: 2543147-2553146 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.177 10.0kb downstream 10.0kb downstream 12682 true AmTr_v1.0_scaffold00044: 2530465-2543146 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.177 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00044: 2530465-2540464 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122045802 5273 Angiosperm View MSA
121346368 5274 Embryophyte View MSA
123428335 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain