Gene : evm_27.TU.AmTr_v1.0_scaffold00044.141 A. trichopoda v1.0
Defline:  (1 of 1) PTHR34051:SF2 - PROTEIN LOW PSII ACCUMULATION 3, CHLOROPLASTIC Genomic Order:  140
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00044.141 Secondary Identifier:  ? PAC:31575504
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00044.141 0.5kb upstream 0.5kb upstream 5910 true AmTr_v1.0_scaffold00044: 2073300-2079209 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.141 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00044: 2078710-2079209 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.141 0.5kb downstream 0.5kb downstream 5910 true AmTr_v1.0_scaffold00044: 2072800-2078709 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.141 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00044: 2072800-2073299 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.141 1.0kb upstream 1.0kb upstream 6410 true AmTr_v1.0_scaffold00044: 2073300-2079709 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.141 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00044: 2078710-2079709 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.141 1.0kb downstream 1.0kb downstream 6410 true AmTr_v1.0_scaffold00044: 2072300-2078709 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.141 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00044: 2072300-2073299 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.141 2.0kb upstream 2.0kb upstream 7410 true AmTr_v1.0_scaffold00044: 2073300-2080709 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.141 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00044: 2078710-2080709 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.141 2.0kb downstream 2.0kb downstream 7410 true AmTr_v1.0_scaffold00044: 2071300-2078709 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.141 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00044: 2071300-2073299 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.141 5.0kb upstream 5.0kb upstream 10410 true AmTr_v1.0_scaffold00044: 2073300-2083709 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.141 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00044: 2078710-2083709 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.141 5.0kb downstream 5.0kb downstream 10410 true AmTr_v1.0_scaffold00044: 2068300-2078709 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.141 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00044: 2068300-2073299 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.141 10.0kb upstream 10.0kb upstream 15410 true AmTr_v1.0_scaffold00044: 2073300-2088709 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.141 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00044: 2078710-2088709 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.141 10.0kb downstream 10.0kb downstream 15410 true AmTr_v1.0_scaffold00044: 2063300-2078709 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.141 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00044: 2063300-2073299 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122045493 5273 Angiosperm View MSA
121344833 5274 Embryophyte View MSA
123428835 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain