Gene : evm_27.TU.AmTr_v1.0_scaffold00043.79 A. trichopoda v1.0
Defline:  (1 of 1) PTHR23315:SF112 - U-BOX DOMAIN-CONTAINING PROTEIN 8 Genomic Order:  79
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00043.79 Secondary Identifier:  ? PAC:31556836
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-7511 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00043.79 0.5kb upstream 0.5kb upstream 1628 true AmTr_v1.0_scaffold00043: 4260155-4261782 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00043.79 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00043: 4261283-4261782 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00043.79 0.5kb downstream 0.5kb downstream 1628 true AmTr_v1.0_scaffold00043: 4259655-4261282 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00043.79 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00043: 4259655-4260154 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00043.79 1.0kb upstream 1.0kb upstream 2128 true AmTr_v1.0_scaffold00043: 4260155-4262282 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00043.79 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00043: 4261283-4262282 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00043.79 1.0kb downstream 1.0kb downstream 2128 true AmTr_v1.0_scaffold00043: 4259155-4261282 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00043.79 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00043: 4259155-4260154 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00043.79 2.0kb upstream 2.0kb upstream 3128 true AmTr_v1.0_scaffold00043: 4260155-4263282 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00043.79 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00043: 4261283-4263282 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00043.79 2.0kb downstream 2.0kb downstream 3128 true AmTr_v1.0_scaffold00043: 4258155-4261282 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00043.79 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00043: 4258155-4260154 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00043.79 5.0kb upstream 5.0kb upstream 6128 true AmTr_v1.0_scaffold00043: 4260155-4266282 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00043.79 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00043: 4261283-4266282 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00043.79 5.0kb downstream 5.0kb downstream 6128 true AmTr_v1.0_scaffold00043: 4255155-4261282 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00043.79 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00043: 4255155-4260154 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00043.79 10.0kb upstream 10.0kb upstream 11128 true AmTr_v1.0_scaffold00043: 4260155-4271282 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00043.79 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00043: 4261283-4271282 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00043.79 10.0kb downstream 10.0kb downstream 11128 true AmTr_v1.0_scaffold00043: 4250155-4261282 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00043.79 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00043: 4250155-4260154 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041968 5273 Angiosperm View MSA
121350406 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain