Gene : evm_27.TU.AmTr_v1.0_scaffold00045.48 A. trichopoda v1.0
Defline:  (1 of 8) 3.2.1.37//3.2.1.55 - Xylan 1,4-beta-xylosidase / Xylobiase // Non-reducing end alpha-L-arabinofuranosidase / Arabinosidase Genomic Order:  47
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00045.48 Secondary Identifier:  ? PAC:31567632
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00045.48 0.5kb upstream 0.5kb upstream 5456 true AmTr_v1.0_scaffold00045: 654556-660011 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.48 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00045: 654556-655055 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.48 0.5kb downstream 0.5kb downstream 5456 true AmTr_v1.0_scaffold00045: 655056-660511 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.48 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00045: 660012-660511 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.48 1.0kb upstream 1.0kb upstream 5956 true AmTr_v1.0_scaffold00045: 654056-660011 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.48 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00045: 654056-655055 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.48 1.0kb downstream 1.0kb downstream 5956 true AmTr_v1.0_scaffold00045: 655056-661011 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.48 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00045: 660012-661011 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.48 2.0kb upstream 2.0kb upstream 6956 true AmTr_v1.0_scaffold00045: 653056-660011 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.48 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00045: 653056-655055 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.48 2.0kb downstream 2.0kb downstream 6956 true AmTr_v1.0_scaffold00045: 655056-662011 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.48 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00045: 660012-662011 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.48 5.0kb upstream 5.0kb upstream 9956 true AmTr_v1.0_scaffold00045: 650056-660011 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.48 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00045: 650056-655055 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.48 5.0kb downstream 5.0kb downstream 9956 true AmTr_v1.0_scaffold00045: 655056-665011 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.48 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00045: 660012-665011 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.48 10.0kb upstream 10.0kb upstream 14956 true AmTr_v1.0_scaffold00045: 645056-660011 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.48 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00045: 645056-655055 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.48 10.0kb downstream 10.0kb downstream 14956 true AmTr_v1.0_scaffold00045: 655056-670011 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.48 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00045: 660012-670011 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122049455 5273 Angiosperm View MSA
121311411 5274 Embryophyte View MSA
123348711 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain