Gene : evm_27.TU.AmTr_v1.0_scaffold00045.15 A. trichopoda v1.0
Defline:  (1 of 1) 2.7.7.3 - Pantetheine-phosphate adenylyltransferase / PPAT Genomic Order:  15
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00045.15 Secondary Identifier:  ? PAC:31567631
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda COA-PWY Amborella trichopoda pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00045.15 0.5kb upstream 0.5kb upstream 23559 true AmTr_v1.0_scaffold00045: 296814-320372 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.15 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00045: 296814-297313 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.15 0.5kb downstream 0.5kb downstream 23559 true AmTr_v1.0_scaffold00045: 297314-320872 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.15 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00045: 320373-320872 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.15 1.0kb upstream 1.0kb upstream 24059 true AmTr_v1.0_scaffold00045: 296314-320372 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.15 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00045: 296314-297313 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.15 1.0kb downstream 1.0kb downstream 24059 true AmTr_v1.0_scaffold00045: 297314-321372 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.15 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00045: 320373-321372 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.15 2.0kb upstream 2.0kb upstream 25059 true AmTr_v1.0_scaffold00045: 295314-320372 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.15 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00045: 295314-297313 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.15 2.0kb downstream 2.0kb downstream 25059 true AmTr_v1.0_scaffold00045: 297314-322372 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.15 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00045: 320373-322372 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.15 5.0kb upstream 5.0kb upstream 28059 true AmTr_v1.0_scaffold00045: 292314-320372 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.15 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00045: 292314-297313 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.15 5.0kb downstream 5.0kb downstream 28059 true AmTr_v1.0_scaffold00045: 297314-325372 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.15 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00045: 320373-325372 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.15 10.0kb upstream 10.0kb upstream 33059 true AmTr_v1.0_scaffold00045: 287314-320372 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.15 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00045: 287314-297313 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.15 10.0kb downstream 10.0kb downstream 33059 true AmTr_v1.0_scaffold00045: 297314-330372 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.15 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00045: 320373-330372 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122050871 5273 Angiosperm View MSA
121345308 5274 Embryophyte View MSA
123425957 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain