Gene : evm_27.TU.AmTr_v1.0_scaffold00044.52 A. trichopoda v1.0
Defline:  (1 of 1) PTHR10459//PTHR10459:SF64 - DNA LIGASE Genomic Order:  52
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00044.52 Secondary Identifier:  ? PAC:31575420
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0 Pathways

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00044.52 0.5kb upstream 0.5kb upstream 12543 true AmTr_v1.0_scaffold00044: 914271-926813 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.52 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00044: 914271-914770 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.52 0.5kb downstream 0.5kb downstream 12543 true AmTr_v1.0_scaffold00044: 914771-927313 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.52 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00044: 926814-927313 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.52 1.0kb upstream 1.0kb upstream 13043 true AmTr_v1.0_scaffold00044: 913771-926813 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.52 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00044: 913771-914770 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.52 1.0kb downstream 1.0kb downstream 13043 true AmTr_v1.0_scaffold00044: 914771-927813 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.52 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00044: 926814-927813 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.52 2.0kb upstream 2.0kb upstream 14043 true AmTr_v1.0_scaffold00044: 912771-926813 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.52 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00044: 912771-914770 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.52 2.0kb downstream 2.0kb downstream 14043 true AmTr_v1.0_scaffold00044: 914771-928813 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.52 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00044: 926814-928813 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.52 5.0kb upstream 5.0kb upstream 17043 true AmTr_v1.0_scaffold00044: 909771-926813 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.52 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00044: 909771-914770 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.52 5.0kb downstream 5.0kb downstream 17043 true AmTr_v1.0_scaffold00044: 914771-931813 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.52 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00044: 926814-931813 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.52 10.0kb upstream 10.0kb upstream 22043 true AmTr_v1.0_scaffold00044: 904771-926813 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.52 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00044: 904771-914770 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.52 10.0kb downstream 10.0kb downstream 22043 true AmTr_v1.0_scaffold00044: 914771-936813 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.52 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00044: 926814-936813 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122051365 5273 Angiosperm View MSA
121345540 5274 Embryophyte View MSA
123380235 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain