Gene : evm_27.TU.AmTr_v1.0_scaffold00044.27 A. trichopoda v1.0
Defline:  (1 of 2) 1.1.1.288 - Xanthoxin dehydrogenase / Xanthoxin oxidase Genomic Order:  27
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00044.27 Secondary Identifier:  ? PAC:31575568
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-695 Amborella trichopoda pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00044.27 0.5kb upstream 0.5kb upstream 1331 true AmTr_v1.0_scaffold00044: 557783-559113 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.27 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00044: 558614-559113 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.27 0.5kb downstream 0.5kb downstream 1331 true AmTr_v1.0_scaffold00044: 557283-558613 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.27 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00044: 557283-557782 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.27 1.0kb upstream 1.0kb upstream 1831 true AmTr_v1.0_scaffold00044: 557783-559613 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.27 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00044: 558614-559613 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.27 1.0kb downstream 1.0kb downstream 1831 true AmTr_v1.0_scaffold00044: 556783-558613 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.27 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00044: 556783-557782 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.27 2.0kb upstream 2.0kb upstream 2831 true AmTr_v1.0_scaffold00044: 557783-560613 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.27 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00044: 558614-560613 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.27 2.0kb downstream 2.0kb downstream 2831 true AmTr_v1.0_scaffold00044: 555783-558613 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.27 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00044: 555783-557782 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.27 5.0kb upstream 5.0kb upstream 5831 true AmTr_v1.0_scaffold00044: 557783-563613 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.27 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00044: 558614-563613 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.27 5.0kb downstream 5.0kb downstream 5831 true AmTr_v1.0_scaffold00044: 552783-558613 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.27 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00044: 552783-557782 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.27 10.0kb upstream 10.0kb upstream 10831 true AmTr_v1.0_scaffold00044: 557783-568613 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.27 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00044: 558614-568613 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.27 10.0kb downstream 10.0kb downstream 10831 true AmTr_v1.0_scaffold00044: 547783-558613 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00044.27 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00044: 547783-557782 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122042997 5273 Angiosperm View MSA
123429133 5275 Viridiplantae View MSA
121351668 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain