Gene : evm_27.TU.AmTr_v1.0_scaffold00045.108 A. trichopoda v1.0
Defline:  (1 of 1) PTHR13495 - NEFA-INTERACTING NUCLEAR PROTEIN NIP30 Genomic Order:  107
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00045.108 Secondary Identifier:  ? PAC:31567617
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00045.108 0.5kb upstream 0.5kb upstream 7270 true AmTr_v1.0_scaffold00045: 1423133-1430402 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.108 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00045: 1429903-1430402 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.108 0.5kb downstream 0.5kb downstream 7270 true AmTr_v1.0_scaffold00045: 1422633-1429902 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.108 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00045: 1422633-1423132 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.108 1.0kb upstream 1.0kb upstream 7770 true AmTr_v1.0_scaffold00045: 1423133-1430902 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.108 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00045: 1429903-1430902 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.108 1.0kb downstream 1.0kb downstream 7770 true AmTr_v1.0_scaffold00045: 1422133-1429902 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.108 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00045: 1422133-1423132 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.108 2.0kb upstream 2.0kb upstream 8770 true AmTr_v1.0_scaffold00045: 1423133-1431902 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.108 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00045: 1429903-1431902 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.108 2.0kb downstream 2.0kb downstream 8770 true AmTr_v1.0_scaffold00045: 1421133-1429902 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.108 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00045: 1421133-1423132 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.108 5.0kb upstream 5.0kb upstream 11770 true AmTr_v1.0_scaffold00045: 1423133-1434902 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.108 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00045: 1429903-1434902 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.108 5.0kb downstream 5.0kb downstream 11770 true AmTr_v1.0_scaffold00045: 1418133-1429902 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.108 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00045: 1418133-1423132 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.108 10.0kb upstream 10.0kb upstream 16770 true AmTr_v1.0_scaffold00045: 1423133-1439902 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.108 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00045: 1429903-1439902 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.108 10.0kb downstream 10.0kb downstream 16770 true AmTr_v1.0_scaffold00045: 1413133-1429902 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00045.108 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00045: 1413133-1423132 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122047119 5273 Angiosperm View MSA
121346332 5274 Embryophyte View MSA
123425229 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain