Gene : evm_27.TU.AmTr_v1.0_scaffold00048.194 A. trichopoda v1.0

Defline:  (1 of 5) PTHR16007 - EPIDIDYMAL MEMBRANE PROTEIN E9-RELATED Genomic Order:  193
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00048.194 Secondary Identifier:  ? PAC:31555624

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00048.194 0.5kb upstream 0.5kb upstream 3415 true AmTr_v1.0_scaffold00048: 4241797-4245211 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.194 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00048: 4241797-4242296 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.194 0.5kb downstream 0.5kb downstream 3415 true AmTr_v1.0_scaffold00048: 4242297-4245711 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.194 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00048: 4245212-4245711 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.194 1.0kb upstream 1.0kb upstream 3915 true AmTr_v1.0_scaffold00048: 4241297-4245211 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.194 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00048: 4241297-4242296 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.194 1.0kb downstream 1.0kb downstream 3915 true AmTr_v1.0_scaffold00048: 4242297-4246211 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.194 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00048: 4245212-4246211 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.194 2.0kb upstream 2.0kb upstream 4915 true AmTr_v1.0_scaffold00048: 4240297-4245211 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.194 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00048: 4240297-4242296 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.194 2.0kb downstream 2.0kb downstream 4915 true AmTr_v1.0_scaffold00048: 4242297-4247211 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.194 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00048: 4245212-4247211 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.194 5.0kb upstream 5.0kb upstream 7915 true AmTr_v1.0_scaffold00048: 4237297-4245211 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.194 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00048: 4237297-4242296 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.194 5.0kb downstream 5.0kb downstream 7915 true AmTr_v1.0_scaffold00048: 4242297-4250211 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.194 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00048: 4245212-4250211 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.194 10.0kb upstream 10.0kb upstream 12915 true AmTr_v1.0_scaffold00048: 4232297-4245211 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.194 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00048: 4232297-4242296 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.194 10.0kb downstream 10.0kb downstream 12915 true AmTr_v1.0_scaffold00048: 4242297-4255211 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00048.194 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00048: 4245212-4255211 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122047488 5273 Angiosperm View MSA
121350277 5274 Embryophyte View MSA
123426219 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain