Gene : evm_27.TU.AmTr_v1.0_scaffold00053.121 A. trichopoda v1.0
Defline:  (1 of 2) PTHR24067//PTHR24067:SF121 - UBIQUITIN-CONJUGATING ENZYME E2 Genomic Order:  119
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00053.121 Secondary Identifier:  ? PAC:31554995
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-7511 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00053.121 0.5kb upstream 0.5kb upstream 2029 true AmTr_v1.0_scaffold00053: 2874782-2876810 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00053.121 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00053: 2876311-2876810 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00053.121 0.5kb downstream 0.5kb downstream 2029 true AmTr_v1.0_scaffold00053: 2874282-2876310 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00053.121 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00053: 2874282-2874781 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00053.121 1.0kb upstream 1.0kb upstream 2529 true AmTr_v1.0_scaffold00053: 2874782-2877310 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00053.121 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00053: 2876311-2877310 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00053.121 1.0kb downstream 1.0kb downstream 2529 true AmTr_v1.0_scaffold00053: 2873782-2876310 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00053.121 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00053: 2873782-2874781 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00053.121 2.0kb upstream 2.0kb upstream 3529 true AmTr_v1.0_scaffold00053: 2874782-2878310 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00053.121 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00053: 2876311-2878310 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00053.121 2.0kb downstream 2.0kb downstream 3529 true AmTr_v1.0_scaffold00053: 2872782-2876310 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00053.121 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00053: 2872782-2874781 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00053.121 5.0kb upstream 5.0kb upstream 6529 true AmTr_v1.0_scaffold00053: 2874782-2881310 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00053.121 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00053: 2876311-2881310 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00053.121 5.0kb downstream 5.0kb downstream 6529 true AmTr_v1.0_scaffold00053: 2869782-2876310 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00053.121 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00053: 2869782-2874781 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00053.121 10.0kb upstream 10.0kb upstream 11529 true AmTr_v1.0_scaffold00053: 2874782-2886310 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00053.121 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00053: 2876311-2886310 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00053.121 10.0kb downstream 10.0kb downstream 11529 true AmTr_v1.0_scaffold00053: 2864782-2876310 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00053.121 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00053: 2864782-2874781 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122046674 5273 Angiosperm View MSA
121349130 5274 Embryophyte View MSA
123424862 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain