Gene : evm_27.TU.AmTr_v1.0_scaffold00049.280 A. trichopoda v1.0

Defline:  (1 of 3) PTHR22835//PTHR22835:SF239 - ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN Genomic Order:  276
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00049.280 Secondary Identifier:  ? PAC:31574816

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00049.280 0.5kb upstream 0.5kb upstream 6631 true AmTr_v1.0_scaffold00049: 4963758-4970388 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.280 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00049: 4969889-4970388 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.280 0.5kb downstream 0.5kb downstream 6631 true AmTr_v1.0_scaffold00049: 4963258-4969888 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.280 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00049: 4963258-4963757 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.280 1.0kb upstream 1.0kb upstream 7131 true AmTr_v1.0_scaffold00049: 4963758-4970888 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.280 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00049: 4969889-4970888 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.280 1.0kb downstream 1.0kb downstream 7131 true AmTr_v1.0_scaffold00049: 4962758-4969888 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.280 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00049: 4962758-4963757 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.280 2.0kb upstream 2.0kb upstream 8131 true AmTr_v1.0_scaffold00049: 4963758-4971888 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.280 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00049: 4969889-4971888 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.280 2.0kb downstream 2.0kb downstream 8131 true AmTr_v1.0_scaffold00049: 4961758-4969888 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.280 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00049: 4961758-4963757 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.280 5.0kb upstream 5.0kb upstream 11131 true AmTr_v1.0_scaffold00049: 4963758-4974888 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.280 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00049: 4969889-4974888 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.280 5.0kb downstream 5.0kb downstream 11131 true AmTr_v1.0_scaffold00049: 4958758-4969888 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.280 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00049: 4958758-4963757 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.280 10.0kb upstream 10.0kb upstream 16131 true AmTr_v1.0_scaffold00049: 4963758-4979888 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.280 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00049: 4969889-4979888 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.280 10.0kb downstream 10.0kb downstream 16131 true AmTr_v1.0_scaffold00049: 4953758-4969888 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00049.280 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00049: 4953758-4963757 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122045823 5273 Angiosperm View MSA
121351762 5274 Embryophyte View MSA
123428079 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain