Gene : evm_27.TU.AmTr_v1.0_scaffold00050.103 A. trichopoda v1.0
Defline:  (1 of 3) 1.13.11.70 - All-trans-10'-apo-beta-carotenal 13,14-cleaving dioxygenase / Carotenoid cleavage dioxygenase 8 Genomic Order:  101
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00050.103 Secondary Identifier:  ? PAC:31571238
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-7101 Amborella trichopoda pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00050.103 0.5kb upstream 0.5kb upstream 11696 true AmTr_v1.0_scaffold00050: 4813399-4825094 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00050.103 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00050: 4824595-4825094 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00050.103 0.5kb downstream 0.5kb downstream 11696 true AmTr_v1.0_scaffold00050: 4812899-4824594 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00050.103 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00050: 4812899-4813398 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00050.103 1.0kb upstream 1.0kb upstream 12196 true AmTr_v1.0_scaffold00050: 4813399-4825594 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00050.103 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00050: 4824595-4825594 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00050.103 1.0kb downstream 1.0kb downstream 12196 true AmTr_v1.0_scaffold00050: 4812399-4824594 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00050.103 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00050: 4812399-4813398 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00050.103 2.0kb upstream 2.0kb upstream 13196 true AmTr_v1.0_scaffold00050: 4813399-4826594 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00050.103 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00050: 4824595-4826594 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00050.103 2.0kb downstream 2.0kb downstream 13196 true AmTr_v1.0_scaffold00050: 4811399-4824594 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00050.103 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00050: 4811399-4813398 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00050.103 5.0kb upstream 5.0kb upstream 16196 true AmTr_v1.0_scaffold00050: 4813399-4829594 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00050.103 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00050: 4824595-4829594 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00050.103 5.0kb downstream 5.0kb downstream 16196 true AmTr_v1.0_scaffold00050: 4808399-4824594 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00050.103 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00050: 4808399-4813398 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00050.103 10.0kb upstream 10.0kb upstream 21196 true AmTr_v1.0_scaffold00050: 4813399-4834594 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00050.103 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00050: 4824595-4834594 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00050.103 10.0kb downstream 10.0kb downstream 21196 true AmTr_v1.0_scaffold00050: 4803399-4824594 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00050.103 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00050: 4803399-4813398 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122048984 5273 Angiosperm View MSA
123428919 5275 Viridiplantae View MSA
121344649 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain