Gene : evm_27.TU.AmTr_v1.0_scaffold00056.13 A. trichopoda v1.0
Defline:  (1 of 1) PTHR14155:SF95 - E3 UBIQUITIN-PROTEIN LIGASE ATL42-RELATED Genomic Order:  13
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00056.13 Secondary Identifier:  ? PAC:31568356
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00056.13 0.5kb upstream 0.5kb upstream 1970 true AmTr_v1.0_scaffold00056: 169347-171316 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00056.13 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00056: 170817-171316 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00056.13 0.5kb downstream 0.5kb downstream 1970 true AmTr_v1.0_scaffold00056: 168847-170816 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00056.13 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00056: 168847-169346 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00056.13 1.0kb upstream 1.0kb upstream 2470 true AmTr_v1.0_scaffold00056: 169347-171816 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00056.13 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00056: 170817-171816 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00056.13 1.0kb downstream 1.0kb downstream 2470 true AmTr_v1.0_scaffold00056: 168347-170816 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00056.13 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00056: 168347-169346 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00056.13 2.0kb upstream 2.0kb upstream 3470 true AmTr_v1.0_scaffold00056: 169347-172816 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00056.13 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00056: 170817-172816 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00056.13 2.0kb downstream 2.0kb downstream 3470 true AmTr_v1.0_scaffold00056: 167347-170816 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00056.13 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00056: 167347-169346 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00056.13 5.0kb upstream 5.0kb upstream 6470 true AmTr_v1.0_scaffold00056: 169347-175816 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00056.13 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00056: 170817-175816 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00056.13 5.0kb downstream 5.0kb downstream 6470 true AmTr_v1.0_scaffold00056: 164347-170816 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00056.13 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00056: 164347-169346 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00056.13 10.0kb upstream 10.0kb upstream 11470 true AmTr_v1.0_scaffold00056: 169347-180816 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00056.13 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00056: 170817-180816 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00056.13 10.0kb downstream 10.0kb downstream 11470 true AmTr_v1.0_scaffold00056: 159347-170816 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00056.13 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00056: 159347-169346 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122047388 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121346576 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain