Gene : evm_27.TU.AmTr_v1.0_scaffold00055.75 A. trichopoda v1.0
Defline:  (1 of 28) PF01535//PF12854//PF13041 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) Genomic Order:  74
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00055.75 Secondary Identifier:  ? PAC:31571679
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00055.75 0.5kb upstream 0.5kb upstream 4981 true AmTr_v1.0_scaffold00055: 2389086-2394066 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00055.75 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00055: 2393567-2394066 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00055.75 0.5kb downstream 0.5kb downstream 4981 true AmTr_v1.0_scaffold00055: 2388586-2393566 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00055.75 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00055: 2388586-2389085 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00055.75 1.0kb upstream 1.0kb upstream 5481 true AmTr_v1.0_scaffold00055: 2389086-2394566 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00055.75 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00055: 2393567-2394566 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00055.75 1.0kb downstream 1.0kb downstream 5481 true AmTr_v1.0_scaffold00055: 2388086-2393566 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00055.75 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00055: 2388086-2389085 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00055.75 2.0kb upstream 2.0kb upstream 6481 true AmTr_v1.0_scaffold00055: 2389086-2395566 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00055.75 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00055: 2393567-2395566 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00055.75 2.0kb downstream 2.0kb downstream 6481 true AmTr_v1.0_scaffold00055: 2387086-2393566 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00055.75 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00055: 2387086-2389085 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00055.75 5.0kb upstream 5.0kb upstream 9481 true AmTr_v1.0_scaffold00055: 2389086-2398566 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00055.75 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00055: 2393567-2398566 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00055.75 5.0kb downstream 5.0kb downstream 9481 true AmTr_v1.0_scaffold00055: 2384086-2393566 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00055.75 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00055: 2384086-2389085 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00055.75 10.0kb upstream 10.0kb upstream 14481 true AmTr_v1.0_scaffold00055: 2389086-2403566 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00055.75 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00055: 2393567-2403566 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00055.75 10.0kb downstream 10.0kb downstream 14481 true AmTr_v1.0_scaffold00055: 2379086-2393566 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00055.75 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00055: 2379086-2389085 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122046765 5273 Angiosperm View MSA
121310656 5274 Embryophyte View MSA
123348085 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain