Gene : evm_27.TU.AmTr_v1.0_scaffold00054.28 A. trichopoda v1.0
Defline:  (1 of 2) PTHR12608:SF6 - GDT1-LIKE PROTEIN 1, CHLOROPLASTIC Genomic Order:  28
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00054.28 Secondary Identifier:  ? PAC:31564543
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00054.28 0.5kb upstream 0.5kb upstream 34987 true AmTr_v1.0_scaffold00054: 1028651-1063637 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00054.28 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00054: 1063138-1063637 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00054.28 0.5kb downstream 0.5kb downstream 34987 true AmTr_v1.0_scaffold00054: 1028151-1063137 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00054.28 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00054: 1028151-1028650 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00054.28 1.0kb upstream 1.0kb upstream 35487 true AmTr_v1.0_scaffold00054: 1028651-1064137 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00054.28 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00054: 1063138-1064137 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00054.28 1.0kb downstream 1.0kb downstream 35487 true AmTr_v1.0_scaffold00054: 1027651-1063137 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00054.28 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00054: 1027651-1028650 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00054.28 2.0kb upstream 2.0kb upstream 36487 true AmTr_v1.0_scaffold00054: 1028651-1065137 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00054.28 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00054: 1063138-1065137 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00054.28 2.0kb downstream 2.0kb downstream 36487 true AmTr_v1.0_scaffold00054: 1026651-1063137 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00054.28 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00054: 1026651-1028650 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00054.28 5.0kb upstream 5.0kb upstream 39487 true AmTr_v1.0_scaffold00054: 1028651-1068137 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00054.28 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00054: 1063138-1068137 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00054.28 5.0kb downstream 5.0kb downstream 39487 true AmTr_v1.0_scaffold00054: 1023651-1063137 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00054.28 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00054: 1023651-1028650 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00054.28 10.0kb upstream 10.0kb upstream 44487 true AmTr_v1.0_scaffold00054: 1028651-1073137 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00054.28 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00054: 1063138-1073137 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00054.28 10.0kb downstream 10.0kb downstream 44487 true AmTr_v1.0_scaffold00054: 1018651-1063137 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00054.28 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00054: 1018651-1028650 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122045430 5273 Angiosperm View MSA
121344510 5274 Embryophyte View MSA
123428056 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain