Gene : evm_27.TU.AmTr_v1.0_scaffold00054.9 A. trichopoda v1.0
Defline:  (1 of 2) PTHR10252//PTHR10252:SF40 - HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED Genomic Order:  9
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00054.9 Secondary Identifier:  ? PAC:31564557
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00054.9 0.5kb upstream 0.5kb upstream 9973 true AmTr_v1.0_scaffold00054: 286413-296385 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00054.9 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00054: 286413-286912 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00054.9 0.5kb downstream 0.5kb downstream 9973 true AmTr_v1.0_scaffold00054: 286913-296885 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00054.9 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00054: 296386-296885 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00054.9 1.0kb upstream 1.0kb upstream 10473 true AmTr_v1.0_scaffold00054: 285913-296385 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00054.9 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00054: 285913-286912 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00054.9 1.0kb downstream 1.0kb downstream 10473 true AmTr_v1.0_scaffold00054: 286913-297385 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00054.9 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00054: 296386-297385 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00054.9 2.0kb upstream 2.0kb upstream 11473 true AmTr_v1.0_scaffold00054: 284913-296385 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00054.9 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00054: 284913-286912 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00054.9 2.0kb downstream 2.0kb downstream 11473 true AmTr_v1.0_scaffold00054: 286913-298385 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00054.9 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00054: 296386-298385 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00054.9 5.0kb upstream 5.0kb upstream 14473 true AmTr_v1.0_scaffold00054: 281913-296385 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00054.9 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00054: 281913-286912 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00054.9 5.0kb downstream 5.0kb downstream 14473 true AmTr_v1.0_scaffold00054: 286913-301385 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00054.9 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00054: 296386-301385 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00054.9 10.0kb upstream 10.0kb upstream 19473 true AmTr_v1.0_scaffold00054: 276913-296385 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00054.9 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00054: 276913-286912 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00054.9 10.0kb downstream 10.0kb downstream 19473 true AmTr_v1.0_scaffold00054: 286913-306385 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00054.9 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00054: 296386-306385 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122049084 5273 Angiosperm View MSA
123429029 5275 Viridiplantae View MSA
121345521 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain