Gene : evm_27.TU.AmTr_v1.0_scaffold00053.2 A. trichopoda v1.0
Defline:  (1 of 1) PTHR10217:SF527 - CYCLIC NUCLEOTIDE-GATED ION CHANNEL 1 Genomic Order:  2
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00053.2 Secondary Identifier:  ? PAC:31555037
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00053.2 0.5kb upstream 0.5kb upstream 16398 true AmTr_v1.0_scaffold00053: 31765-48162 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00053.2 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00053: 31765-32264 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00053.2 0.5kb downstream 0.5kb downstream 16398 true AmTr_v1.0_scaffold00053: 32265-48662 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00053.2 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00053: 48163-48662 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00053.2 1.0kb upstream 1.0kb upstream 16898 true AmTr_v1.0_scaffold00053: 31265-48162 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00053.2 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00053: 31265-32264 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00053.2 1.0kb downstream 1.0kb downstream 16898 true AmTr_v1.0_scaffold00053: 32265-49162 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00053.2 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00053: 48163-49162 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00053.2 2.0kb upstream 2.0kb upstream 17898 true AmTr_v1.0_scaffold00053: 30265-48162 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00053.2 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00053: 30265-32264 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00053.2 2.0kb downstream 2.0kb downstream 17898 true AmTr_v1.0_scaffold00053: 32265-50162 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00053.2 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00053: 48163-50162 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00053.2 5.0kb upstream 5.0kb upstream 20898 true AmTr_v1.0_scaffold00053: 27265-48162 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00053.2 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00053: 27265-32264 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00053.2 5.0kb downstream 5.0kb downstream 20898 true AmTr_v1.0_scaffold00053: 32265-53162 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00053.2 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00053: 48163-53162 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00053.2 10.0kb upstream 10.0kb upstream 25898 true AmTr_v1.0_scaffold00053: 22265-48162 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00053.2 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00053: 22265-32264 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00053.2 10.0kb downstream 10.0kb downstream 25898 true AmTr_v1.0_scaffold00053: 32265-58162 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00053.2 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00053: 48163-58162 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122044448 5273 Angiosperm View MSA
121351754 5274 Embryophyte View MSA
123428762 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain