Gene : evm_27.TU.AmTr_v1.0_scaffold00053.49 A. trichopoda v1.0
Defline:  (1 of 1) 2.6.1.45 - Serine--glyoxylate transaminase / SGAT Genomic Order:  49
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00053.49 Secondary Identifier:  ? PAC:31555072
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda GLYSYN-ALA-PWY Amborella trichopoda pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00053.49 0.5kb upstream 0.5kb upstream 6466 true AmTr_v1.0_scaffold00053: 1110355-1116820 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00053.49 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00053: 1116321-1116820 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00053.49 0.5kb downstream 0.5kb downstream 6466 true AmTr_v1.0_scaffold00053: 1109855-1116320 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00053.49 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00053: 1109855-1110354 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00053.49 1.0kb upstream 1.0kb upstream 6966 true AmTr_v1.0_scaffold00053: 1110355-1117320 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00053.49 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00053: 1116321-1117320 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00053.49 1.0kb downstream 1.0kb downstream 6966 true AmTr_v1.0_scaffold00053: 1109355-1116320 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00053.49 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00053: 1109355-1110354 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00053.49 2.0kb upstream 2.0kb upstream 7966 true AmTr_v1.0_scaffold00053: 1110355-1118320 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00053.49 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00053: 1116321-1118320 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00053.49 2.0kb downstream 2.0kb downstream 7966 true AmTr_v1.0_scaffold00053: 1108355-1116320 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00053.49 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00053: 1108355-1110354 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00053.49 5.0kb upstream 5.0kb upstream 10966 true AmTr_v1.0_scaffold00053: 1110355-1121320 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00053.49 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00053: 1116321-1121320 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00053.49 5.0kb downstream 5.0kb downstream 10966 true AmTr_v1.0_scaffold00053: 1105355-1116320 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00053.49 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00053: 1105355-1110354 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00053.49 10.0kb upstream 10.0kb upstream 15966 true AmTr_v1.0_scaffold00053: 1110355-1126320 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00053.49 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00053: 1116321-1126320 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00053.49 10.0kb downstream 10.0kb downstream 15966 true AmTr_v1.0_scaffold00053: 1100355-1116320 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00053.49 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00053: 1100355-1110354 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122044965 5273 Angiosperm View MSA
121345609 5274 Embryophyte View MSA
123427199 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain