Gene : evm_27.TU.AmTr_v1.0_scaffold00058.156 A. trichopoda v1.0
Defline:  (1 of 1) PTHR30544//PTHR30544:SF3 - 23S RRNA METHYLTRANSFERASE Genomic Order:  153
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00058.156 Secondary Identifier:  ? PAC:31559360
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00058.156 0.5kb upstream 0.5kb upstream 10166 true AmTr_v1.0_scaffold00058: 2764762-2774927 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.156 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00058: 2764762-2765261 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.156 0.5kb downstream 0.5kb downstream 10166 true AmTr_v1.0_scaffold00058: 2765262-2775427 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.156 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00058: 2774928-2775427 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.156 1.0kb upstream 1.0kb upstream 10666 true AmTr_v1.0_scaffold00058: 2764262-2774927 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.156 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00058: 2764262-2765261 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.156 1.0kb downstream 1.0kb downstream 10666 true AmTr_v1.0_scaffold00058: 2765262-2775927 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.156 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00058: 2774928-2775927 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.156 2.0kb upstream 2.0kb upstream 11666 true AmTr_v1.0_scaffold00058: 2763262-2774927 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.156 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00058: 2763262-2765261 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.156 2.0kb downstream 2.0kb downstream 11666 true AmTr_v1.0_scaffold00058: 2765262-2776927 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.156 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00058: 2774928-2776927 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.156 5.0kb upstream 5.0kb upstream 14666 true AmTr_v1.0_scaffold00058: 2760262-2774927 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.156 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00058: 2760262-2765261 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.156 5.0kb downstream 5.0kb downstream 14666 true AmTr_v1.0_scaffold00058: 2765262-2779927 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.156 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00058: 2774928-2779927 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.156 10.0kb upstream 10.0kb upstream 19666 true AmTr_v1.0_scaffold00058: 2755262-2774927 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.156 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00058: 2755262-2765261 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.156 10.0kb downstream 10.0kb downstream 19666 true AmTr_v1.0_scaffold00058: 2765262-2784927 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.156 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00058: 2774928-2784927 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122043195 5273 Angiosperm View MSA
123429187 5275 Viridiplantae View MSA
121346291 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain