Gene : evm_27.TU.AmTr_v1.0_scaffold00058.194 A. trichopoda v1.0
Defline:  (1 of 1) 1.1.1.267 - 1-deoxy-D-xylulose-5-phosphate reductoisomerase / DXP-reductoisomerase Genomic Order:  191
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00058.194 Secondary Identifier:  ? PAC:31559202
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-7560 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00058.194 0.5kb upstream 0.5kb upstream 7355 true AmTr_v1.0_scaffold00058: 3499394-3506748 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.194 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00058: 3499394-3499893 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.194 0.5kb downstream 0.5kb downstream 7355 true AmTr_v1.0_scaffold00058: 3499894-3507248 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.194 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00058: 3506749-3507248 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.194 1.0kb upstream 1.0kb upstream 7855 true AmTr_v1.0_scaffold00058: 3498894-3506748 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.194 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00058: 3498894-3499893 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.194 1.0kb downstream 1.0kb downstream 7855 true AmTr_v1.0_scaffold00058: 3499894-3507748 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.194 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00058: 3506749-3507748 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.194 2.0kb upstream 2.0kb upstream 8855 true AmTr_v1.0_scaffold00058: 3497894-3506748 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.194 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00058: 3497894-3499893 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.194 2.0kb downstream 2.0kb downstream 8855 true AmTr_v1.0_scaffold00058: 3499894-3508748 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.194 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00058: 3506749-3508748 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.194 5.0kb upstream 5.0kb upstream 11855 true AmTr_v1.0_scaffold00058: 3494894-3506748 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.194 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00058: 3494894-3499893 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.194 5.0kb downstream 5.0kb downstream 11855 true AmTr_v1.0_scaffold00058: 3499894-3511748 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.194 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00058: 3506749-3511748 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.194 10.0kb upstream 10.0kb upstream 16855 true AmTr_v1.0_scaffold00058: 3489894-3506748 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.194 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00058: 3489894-3499893 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.194 10.0kb downstream 10.0kb downstream 16855 true AmTr_v1.0_scaffold00058: 3499894-3516748 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.194 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00058: 3506749-3516748 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041406 5273 Angiosperm View MSA
121344534 5274 Embryophyte View MSA
123424385 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain