Gene : evm_27.TU.AmTr_v1.0_scaffold00058.177 A. trichopoda v1.0
Defline:  (1 of 1) PF00929//PF13912 - Exonuclease (RNase_T) // C2H2-type zinc finger (zf-C2H2_6) Genomic Order:  174
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00058.177 Secondary Identifier:  ? PAC:31559322
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00058.177 0.5kb upstream 0.5kb upstream 6326 true AmTr_v1.0_scaffold00058: 3142257-3148582 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.177 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00058: 3142257-3142756 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.177 0.5kb downstream 0.5kb downstream 6326 true AmTr_v1.0_scaffold00058: 3142757-3149082 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.177 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00058: 3148583-3149082 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.177 1.0kb upstream 1.0kb upstream 6826 true AmTr_v1.0_scaffold00058: 3141757-3148582 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.177 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00058: 3141757-3142756 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.177 1.0kb downstream 1.0kb downstream 6826 true AmTr_v1.0_scaffold00058: 3142757-3149582 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.177 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00058: 3148583-3149582 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.177 2.0kb upstream 2.0kb upstream 7826 true AmTr_v1.0_scaffold00058: 3140757-3148582 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.177 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00058: 3140757-3142756 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.177 2.0kb downstream 2.0kb downstream 7826 true AmTr_v1.0_scaffold00058: 3142757-3150582 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.177 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00058: 3148583-3150582 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.177 5.0kb upstream 5.0kb upstream 10826 true AmTr_v1.0_scaffold00058: 3137757-3148582 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.177 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00058: 3137757-3142756 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.177 5.0kb downstream 5.0kb downstream 10826 true AmTr_v1.0_scaffold00058: 3142757-3153582 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.177 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00058: 3148583-3153582 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.177 10.0kb upstream 10.0kb upstream 15826 true AmTr_v1.0_scaffold00058: 3132757-3148582 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.177 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00058: 3132757-3142756 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.177 10.0kb downstream 10.0kb downstream 15826 true AmTr_v1.0_scaffold00058: 3142757-3158582 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.177 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00058: 3148583-3158582 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122048562 5273 Angiosperm View MSA
121349670 5274 Embryophyte View MSA
123428502 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain