Gene : evm_27.TU.AmTr_v1.0_scaffold00057.53 A. trichopoda v1.0
Defline:  (1 of 22) PF05553 - Cotton fibre expressed protein (DUF761) Genomic Order:  53
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00057.53 Secondary Identifier:  ? PAC:31574290
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00057.53 0.5kb upstream 0.5kb upstream 1055 true AmTr_v1.0_scaffold00057: 931453-932507 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.53 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00057: 931453-931952 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.53 0.5kb downstream 0.5kb downstream 1055 true AmTr_v1.0_scaffold00057: 931953-933007 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.53 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00057: 932508-933007 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.53 1.0kb upstream 1.0kb upstream 1555 true AmTr_v1.0_scaffold00057: 930953-932507 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.53 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00057: 930953-931952 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.53 1.0kb downstream 1.0kb downstream 1555 true AmTr_v1.0_scaffold00057: 931953-933507 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.53 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00057: 932508-933507 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.53 2.0kb upstream 2.0kb upstream 2555 true AmTr_v1.0_scaffold00057: 929953-932507 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.53 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00057: 929953-931952 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.53 2.0kb downstream 2.0kb downstream 2555 true AmTr_v1.0_scaffold00057: 931953-934507 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.53 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00057: 932508-934507 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.53 5.0kb upstream 5.0kb upstream 5555 true AmTr_v1.0_scaffold00057: 926953-932507 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.53 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00057: 926953-931952 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.53 5.0kb downstream 5.0kb downstream 5555 true AmTr_v1.0_scaffold00057: 931953-937507 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.53 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00057: 932508-937507 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.53 10.0kb upstream 10.0kb upstream 10555 true AmTr_v1.0_scaffold00057: 921953-932507 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.53 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00057: 921953-931952 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.53 10.0kb downstream 10.0kb downstream 10555 true AmTr_v1.0_scaffold00057: 931953-942507 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.53 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00057: 932508-942507 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122048852 5273 Angiosperm View MSA
121311139 5274 Embryophyte View MSA
123348476 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain