Gene : evm_27.TU.AmTr_v1.0_scaffold00058.101 A. trichopoda v1.0
Defline:  (1 of 1) PF05066 - HB1, ASXL, restriction endonuclease HTH domain (HARE-HTH) Genomic Order:  99
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00058.101 Secondary Identifier:  ? PAC:31559332
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00058.101 0.5kb upstream 0.5kb upstream 11215 true AmTr_v1.0_scaffold00058: 1931577-1942791 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.101 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00058: 1942292-1942791 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.101 0.5kb downstream 0.5kb downstream 11215 true AmTr_v1.0_scaffold00058: 1931077-1942291 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.101 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00058: 1931077-1931576 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.101 1.0kb upstream 1.0kb upstream 11715 true AmTr_v1.0_scaffold00058: 1931577-1943291 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.101 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00058: 1942292-1943291 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.101 1.0kb downstream 1.0kb downstream 11715 true AmTr_v1.0_scaffold00058: 1930577-1942291 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.101 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00058: 1930577-1931576 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.101 2.0kb upstream 2.0kb upstream 12715 true AmTr_v1.0_scaffold00058: 1931577-1944291 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.101 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00058: 1942292-1944291 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.101 2.0kb downstream 2.0kb downstream 12715 true AmTr_v1.0_scaffold00058: 1929577-1942291 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.101 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00058: 1929577-1931576 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.101 5.0kb upstream 5.0kb upstream 15715 true AmTr_v1.0_scaffold00058: 1931577-1947291 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.101 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00058: 1942292-1947291 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.101 5.0kb downstream 5.0kb downstream 15715 true AmTr_v1.0_scaffold00058: 1926577-1942291 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.101 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00058: 1926577-1931576 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.101 10.0kb upstream 10.0kb upstream 20715 true AmTr_v1.0_scaffold00058: 1931577-1952291 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.101 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00058: 1942292-1952291 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.101 10.0kb downstream 10.0kb downstream 20715 true AmTr_v1.0_scaffold00058: 1921577-1942291 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.101 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00058: 1921577-1931576 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122044576 5273 Angiosperm View MSA
121345296 5274 Embryophyte View MSA
123427491 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain