Gene : evm_27.TU.AmTr_v1.0_scaffold00057.187 A. trichopoda v1.0
Defline:  (1 of 3) 2.6.1.83 - LL-diaminopimelate aminotransferase / LL-diaminopimelate transaminase Genomic Order:  186
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00057.187 Secondary Identifier:  ? PAC:31574449
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-5097 Amborella trichopoda pathologic  
Atrichopoda PWY-724 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00057.187 0.5kb upstream 0.5kb upstream 11286 true AmTr_v1.0_scaffold00057: 2953175-2964460 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.187 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00057: 2953175-2953674 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.187 0.5kb downstream 0.5kb downstream 11286 true AmTr_v1.0_scaffold00057: 2953675-2964960 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.187 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00057: 2964461-2964960 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.187 1.0kb upstream 1.0kb upstream 11786 true AmTr_v1.0_scaffold00057: 2952675-2964460 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.187 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00057: 2952675-2953674 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.187 1.0kb downstream 1.0kb downstream 11786 true AmTr_v1.0_scaffold00057: 2953675-2965460 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.187 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00057: 2964461-2965460 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.187 2.0kb upstream 2.0kb upstream 12786 true AmTr_v1.0_scaffold00057: 2951675-2964460 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.187 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00057: 2951675-2953674 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.187 2.0kb downstream 2.0kb downstream 12786 true AmTr_v1.0_scaffold00057: 2953675-2966460 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.187 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00057: 2964461-2966460 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.187 5.0kb upstream 5.0kb upstream 15786 true AmTr_v1.0_scaffold00057: 2948675-2964460 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.187 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00057: 2948675-2953674 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.187 5.0kb downstream 5.0kb downstream 15786 true AmTr_v1.0_scaffold00057: 2953675-2969460 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.187 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00057: 2964461-2969460 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.187 10.0kb upstream 10.0kb upstream 20786 true AmTr_v1.0_scaffold00057: 2943675-2964460 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.187 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00057: 2943675-2953674 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.187 10.0kb downstream 10.0kb downstream 20786 true AmTr_v1.0_scaffold00057: 2953675-2974460 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.187 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00057: 2964461-2974460 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122045161 5273 Angiosperm View MSA
121344343 5274 Embryophyte View MSA
123424947 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain