Gene : evm_27.TU.AmTr_v1.0_scaffold00057.203 A. trichopoda v1.0
Defline:  (1 of 2) 6.1.1.1 - Tyrosine--tRNA ligase / Tyrosyl-tRNA synthetase Genomic Order:  202
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00057.203 Secondary Identifier:  ? PAC:31574377
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda TRNA-CHARGING-PWY Amborella trichopoda pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00057.203 0.5kb upstream 0.5kb upstream 17030 true AmTr_v1.0_scaffold00057: 3280730-3297759 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.203 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00057: 3280730-3281229 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.203 0.5kb downstream 0.5kb downstream 17030 true AmTr_v1.0_scaffold00057: 3281230-3298259 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.203 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00057: 3297760-3298259 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.203 1.0kb upstream 1.0kb upstream 17530 true AmTr_v1.0_scaffold00057: 3280230-3297759 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.203 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00057: 3280230-3281229 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.203 1.0kb downstream 1.0kb downstream 17530 true AmTr_v1.0_scaffold00057: 3281230-3298759 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.203 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00057: 3297760-3298759 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.203 2.0kb upstream 2.0kb upstream 18530 true AmTr_v1.0_scaffold00057: 3279230-3297759 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.203 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00057: 3279230-3281229 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.203 2.0kb downstream 2.0kb downstream 18530 true AmTr_v1.0_scaffold00057: 3281230-3299759 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.203 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00057: 3297760-3299759 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.203 5.0kb upstream 5.0kb upstream 21530 true AmTr_v1.0_scaffold00057: 3276230-3297759 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.203 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00057: 3276230-3281229 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.203 5.0kb downstream 5.0kb downstream 21530 true AmTr_v1.0_scaffold00057: 3281230-3302759 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.203 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00057: 3297760-3302759 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.203 10.0kb upstream 10.0kb upstream 26530 true AmTr_v1.0_scaffold00057: 3271230-3297759 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.203 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00057: 3271230-3281229 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.203 10.0kb downstream 10.0kb downstream 26530 true AmTr_v1.0_scaffold00057: 3281230-3307759 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.203 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00057: 3297760-3307759 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041140 5273 Angiosperm View MSA
121344192 5274 Embryophyte View MSA
123424631 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain