Gene : evm_27.TU.AmTr_v1.0_scaffold00057.115 A. trichopoda v1.0
Defline:  (1 of 1) PTHR31148:SF1 - U1 SMALL NUCLEAR RIBONUCLEOPROTEIN C Genomic Order:  114
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00057.115 Secondary Identifier:  ? PAC:31574325
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00057.115 0.5kb upstream 0.5kb upstream 7715 true AmTr_v1.0_scaffold00057: 1847850-1855564 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.115 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00057: 1847850-1848349 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.115 0.5kb downstream 0.5kb downstream 7715 true AmTr_v1.0_scaffold00057: 1848350-1856064 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.115 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00057: 1855565-1856064 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.115 1.0kb upstream 1.0kb upstream 8215 true AmTr_v1.0_scaffold00057: 1847350-1855564 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.115 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00057: 1847350-1848349 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.115 1.0kb downstream 1.0kb downstream 8215 true AmTr_v1.0_scaffold00057: 1848350-1856564 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.115 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00057: 1855565-1856564 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.115 2.0kb upstream 2.0kb upstream 9215 true AmTr_v1.0_scaffold00057: 1846350-1855564 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.115 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00057: 1846350-1848349 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.115 2.0kb downstream 2.0kb downstream 9215 true AmTr_v1.0_scaffold00057: 1848350-1857564 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.115 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00057: 1855565-1857564 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.115 5.0kb upstream 5.0kb upstream 12215 true AmTr_v1.0_scaffold00057: 1843350-1855564 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.115 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00057: 1843350-1848349 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.115 5.0kb downstream 5.0kb downstream 12215 true AmTr_v1.0_scaffold00057: 1848350-1860564 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.115 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00057: 1855565-1860564 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.115 10.0kb upstream 10.0kb upstream 17215 true AmTr_v1.0_scaffold00057: 1838350-1855564 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.115 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00057: 1838350-1848349 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.115 10.0kb downstream 10.0kb downstream 17215 true AmTr_v1.0_scaffold00057: 1848350-1865564 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.115 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00057: 1855565-1865564 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122048788 5273 Angiosperm View MSA
121348287 5274 Embryophyte View MSA
123425878 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain