Gene : evm_27.TU.AmTr_v1.0_scaffold00057.112 A. trichopoda v1.0
Defline:  (1 of 4) KOG0144 - RNA-binding protein CUGBP1/BRUNO (RRM superfamily) Genomic Order:  111
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00057.112 Secondary Identifier:  ? PAC:31574409
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00057.112 0.5kb upstream 0.5kb upstream 6559 true AmTr_v1.0_scaffold00057: 1787881-1794439 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.112 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00057: 1793940-1794439 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.112 0.5kb downstream 0.5kb downstream 6559 true AmTr_v1.0_scaffold00057: 1787381-1793939 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.112 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00057: 1787381-1787880 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.112 1.0kb upstream 1.0kb upstream 7059 true AmTr_v1.0_scaffold00057: 1787881-1794939 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.112 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00057: 1793940-1794939 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.112 1.0kb downstream 1.0kb downstream 7059 true AmTr_v1.0_scaffold00057: 1786881-1793939 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.112 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00057: 1786881-1787880 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.112 2.0kb upstream 2.0kb upstream 8059 true AmTr_v1.0_scaffold00057: 1787881-1795939 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.112 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00057: 1793940-1795939 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.112 2.0kb downstream 2.0kb downstream 8059 true AmTr_v1.0_scaffold00057: 1785881-1793939 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.112 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00057: 1785881-1787880 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.112 5.0kb upstream 5.0kb upstream 11059 true AmTr_v1.0_scaffold00057: 1787881-1798939 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.112 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00057: 1793940-1798939 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.112 5.0kb downstream 5.0kb downstream 11059 true AmTr_v1.0_scaffold00057: 1782881-1793939 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.112 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00057: 1782881-1787880 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.112 10.0kb upstream 10.0kb upstream 16059 true AmTr_v1.0_scaffold00057: 1787881-1803939 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.112 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00057: 1793940-1803939 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.112 10.0kb downstream 10.0kb downstream 16059 true AmTr_v1.0_scaffold00057: 1777881-1793939 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00057.112 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00057: 1777881-1787880 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122044702 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121349683 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain