Gene : evm_27.TU.AmTr_v1.0_scaffold00058.91 A. trichopoda v1.0
Defline:  (1 of 1) PTHR11451:SF21 - BIFUNCTIONAL GLUTAMATE/PROLINE--TRNA LIGASE Genomic Order:  89
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00058.91 Secondary Identifier:  ? PAC:31559164
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda TRNA-CHARGING-PWY Amborella trichopoda pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00058.91 0.5kb upstream 0.5kb upstream 10873 true AmTr_v1.0_scaffold00058: 1719046-1729918 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.91 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00058: 1719046-1719545 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.91 0.5kb downstream 0.5kb downstream 10873 true AmTr_v1.0_scaffold00058: 1719546-1730418 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.91 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00058: 1729919-1730418 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.91 1.0kb upstream 1.0kb upstream 11373 true AmTr_v1.0_scaffold00058: 1718546-1729918 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.91 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00058: 1718546-1719545 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.91 1.0kb downstream 1.0kb downstream 11373 true AmTr_v1.0_scaffold00058: 1719546-1730918 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.91 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00058: 1729919-1730918 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.91 2.0kb upstream 2.0kb upstream 12373 true AmTr_v1.0_scaffold00058: 1717546-1729918 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.91 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00058: 1717546-1719545 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.91 2.0kb downstream 2.0kb downstream 12373 true AmTr_v1.0_scaffold00058: 1719546-1731918 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.91 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00058: 1729919-1731918 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.91 5.0kb upstream 5.0kb upstream 15373 true AmTr_v1.0_scaffold00058: 1714546-1729918 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.91 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00058: 1714546-1719545 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.91 5.0kb downstream 5.0kb downstream 15373 true AmTr_v1.0_scaffold00058: 1719546-1734918 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.91 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00058: 1729919-1734918 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.91 10.0kb upstream 10.0kb upstream 20373 true AmTr_v1.0_scaffold00058: 1709546-1729918 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.91 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00058: 1709546-1719545 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.91 10.0kb downstream 10.0kb downstream 20373 true AmTr_v1.0_scaffold00058: 1719546-1739918 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00058.91 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00058: 1729919-1739918 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122046547 5273 Angiosperm View MSA
121346675 5274 Embryophyte View MSA
123428629 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain