Gene : evm_27.TU.AmTr_v1.0_scaffold00062.171 A. trichopoda v1.0

Genomic Order:  170 Name:  ? evm_27.TU.AmTr_v1.0_scaffold00062.171
Secondary Identifier:  ? PAC:31557223

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00062.171 0.5kb upstream 0.5kb upstream 31051 true AmTr_v1.0_scaffold00062: 2908155-2939205 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00062.171 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00062: 2908155-2908654 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00062.171 0.5kb downstream 0.5kb downstream 31051 true AmTr_v1.0_scaffold00062: 2908655-2939705 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00062.171 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00062: 2939206-2939705 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00062.171 1.0kb upstream 1.0kb upstream 31551 true AmTr_v1.0_scaffold00062: 2907655-2939205 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00062.171 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00062: 2907655-2908654 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00062.171 1.0kb downstream 1.0kb downstream 31551 true AmTr_v1.0_scaffold00062: 2908655-2940205 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00062.171 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00062: 2939206-2940205 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00062.171 2.0kb upstream 2.0kb upstream 32551 true AmTr_v1.0_scaffold00062: 2906655-2939205 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00062.171 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00062: 2906655-2908654 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00062.171 2.0kb downstream 2.0kb downstream 32551 true AmTr_v1.0_scaffold00062: 2908655-2941205 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00062.171 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00062: 2939206-2941205 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00062.171 5.0kb upstream 5.0kb upstream 35551 true AmTr_v1.0_scaffold00062: 2903655-2939205 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00062.171 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00062: 2903655-2908654 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00062.171 5.0kb downstream 5.0kb downstream 35551 true AmTr_v1.0_scaffold00062: 2908655-2944205 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00062.171 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00062: 2939206-2944205 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00062.171 10.0kb upstream 10.0kb upstream 40551 true AmTr_v1.0_scaffold00062: 2898655-2939205 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00062.171 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00062: 2898655-2908654 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00062.171 10.0kb downstream 10.0kb downstream 40551 true AmTr_v1.0_scaffold00062: 2908655-2949205 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00062.171 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00062: 2939206-2949205 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122047596 5273 Angiosperm View MSA
121310769 5274 Embryophyte View MSA
123348175 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain