Gene : evm_27.TU.AmTr_v1.0_scaffold00061.248 A. trichopoda v1.0
Defline:  (1 of 1) 2.3.1.9 - Acetyl-CoA C-acetyltransferase / Acetoacetyl-CoA thiolase Genomic Order:  241
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00061.248 Secondary Identifier:  ? PAC:31564793
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda ILEUDEG-PWY Amborella trichopoda pathologic  
Atrichopoda PWY-5910 Amborella trichopoda pathologic  
Atrichopoda PWY-922 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00061.248 0.5kb upstream 0.5kb upstream 9937 true AmTr_v1.0_scaffold00061: 3788590-3798526 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.248 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00061: 3788590-3789089 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.248 0.5kb downstream 0.5kb downstream 9937 true AmTr_v1.0_scaffold00061: 3789090-3799026 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.248 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00061: 3798527-3799026 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.248 1.0kb upstream 1.0kb upstream 10437 true AmTr_v1.0_scaffold00061: 3788090-3798526 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.248 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00061: 3788090-3789089 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.248 1.0kb downstream 1.0kb downstream 10437 true AmTr_v1.0_scaffold00061: 3789090-3799526 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.248 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00061: 3798527-3799526 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.248 2.0kb upstream 2.0kb upstream 11437 true AmTr_v1.0_scaffold00061: 3787090-3798526 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.248 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00061: 3787090-3789089 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.248 2.0kb downstream 2.0kb downstream 11437 true AmTr_v1.0_scaffold00061: 3789090-3800526 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.248 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00061: 3798527-3800526 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.248 5.0kb upstream 5.0kb upstream 14437 true AmTr_v1.0_scaffold00061: 3784090-3798526 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.248 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00061: 3784090-3789089 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.248 5.0kb downstream 5.0kb downstream 14437 true AmTr_v1.0_scaffold00061: 3789090-3803526 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.248 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00061: 3798527-3803526 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.248 10.0kb upstream 10.0kb upstream 19437 true AmTr_v1.0_scaffold00061: 3779090-3798526 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.248 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00061: 3779090-3789089 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.248 10.0kb downstream 10.0kb downstream 19437 true AmTr_v1.0_scaffold00061: 3789090-3808526 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.248 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00061: 3798527-3808526 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122045789 5273 Angiosperm View MSA
121344005 5274 Embryophyte View MSA
123427573 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain