Gene : evm_27.TU.AmTr_v1.0_scaffold00061.152 A. trichopoda v1.0
Defline:  (1 of 1) PTHR22600:SF16 - BETA-HEXOSAMINIDASE 1 Genomic Order:  148
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00061.152 Secondary Identifier:  ? PAC:31564809
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-6902 Amborella trichopoda pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00061.152 0.5kb upstream 0.5kb upstream 13037 true AmTr_v1.0_scaffold00061: 2487547-2500583 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.152 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00061: 2487547-2488046 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.152 0.5kb downstream 0.5kb downstream 13037 true AmTr_v1.0_scaffold00061: 2488047-2501083 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.152 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00061: 2500584-2501083 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.152 1.0kb upstream 1.0kb upstream 13537 true AmTr_v1.0_scaffold00061: 2487047-2500583 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.152 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00061: 2487047-2488046 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.152 1.0kb downstream 1.0kb downstream 13537 true AmTr_v1.0_scaffold00061: 2488047-2501583 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.152 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00061: 2500584-2501583 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.152 2.0kb upstream 2.0kb upstream 14537 true AmTr_v1.0_scaffold00061: 2486047-2500583 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.152 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00061: 2486047-2488046 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.152 2.0kb downstream 2.0kb downstream 14537 true AmTr_v1.0_scaffold00061: 2488047-2502583 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.152 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00061: 2500584-2502583 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.152 5.0kb upstream 5.0kb upstream 17537 true AmTr_v1.0_scaffold00061: 2483047-2500583 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.152 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00061: 2483047-2488046 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.152 5.0kb downstream 5.0kb downstream 17537 true AmTr_v1.0_scaffold00061: 2488047-2505583 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.152 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00061: 2500584-2505583 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.152 10.0kb upstream 10.0kb upstream 22537 true AmTr_v1.0_scaffold00061: 2478047-2500583 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.152 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00061: 2478047-2488046 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.152 10.0kb downstream 10.0kb downstream 22537 true AmTr_v1.0_scaffold00061: 2488047-2510583 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.152 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00061: 2500584-2510583 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122047167 5273 Angiosperm View MSA
121346826 5274 Embryophyte View MSA
123428053 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain