Gene : evm_27.TU.AmTr_v1.0_scaffold00061.113 A. trichopoda v1.0
Defline:  (1 of 1) PTHR12856 - TRANSCRIPTION INITIATION FACTOR IIH-RELATED Genomic Order:  110
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00061.113 Secondary Identifier:  ? PAC:31564833
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00061.113 0.5kb upstream 0.5kb upstream 15775 true AmTr_v1.0_scaffold00061: 1893921-1909695 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.113 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00061: 1909196-1909695 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.113 0.5kb downstream 0.5kb downstream 15775 true AmTr_v1.0_scaffold00061: 1893421-1909195 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.113 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00061: 1893421-1893920 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.113 1.0kb upstream 1.0kb upstream 16275 true AmTr_v1.0_scaffold00061: 1893921-1910195 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.113 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00061: 1909196-1910195 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.113 1.0kb downstream 1.0kb downstream 16275 true AmTr_v1.0_scaffold00061: 1892921-1909195 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.113 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00061: 1892921-1893920 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.113 2.0kb upstream 2.0kb upstream 17275 true AmTr_v1.0_scaffold00061: 1893921-1911195 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.113 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00061: 1909196-1911195 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.113 2.0kb downstream 2.0kb downstream 17275 true AmTr_v1.0_scaffold00061: 1891921-1909195 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.113 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00061: 1891921-1893920 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.113 5.0kb upstream 5.0kb upstream 20275 true AmTr_v1.0_scaffold00061: 1893921-1914195 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.113 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00061: 1909196-1914195 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.113 5.0kb downstream 5.0kb downstream 20275 true AmTr_v1.0_scaffold00061: 1888921-1909195 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.113 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00061: 1888921-1893920 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.113 10.0kb upstream 10.0kb upstream 25275 true AmTr_v1.0_scaffold00061: 1893921-1919195 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.113 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00061: 1909196-1919195 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.113 10.0kb downstream 10.0kb downstream 25275 true AmTr_v1.0_scaffold00061: 1883921-1909195 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.113 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00061: 1883921-1893920 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122047682 5273 Angiosperm View MSA
121347472 5274 Embryophyte View MSA
123425427 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain