Gene : evm_27.TU.AmTr_v1.0_scaffold00061.171 A. trichopoda v1.0
Defline:  (1 of 1) PTHR13011 - TFIIF-ALPHA Genomic Order:  167
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00061.171 Secondary Identifier:  ? PAC:31564810
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00061.171 0.5kb upstream 0.5kb upstream 27004 true AmTr_v1.0_scaffold00061: 2651331-2678334 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.171 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00061: 2651331-2651830 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.171 0.5kb downstream 0.5kb downstream 27004 true AmTr_v1.0_scaffold00061: 2651831-2678834 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.171 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00061: 2678335-2678834 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.171 1.0kb upstream 1.0kb upstream 27504 true AmTr_v1.0_scaffold00061: 2650831-2678334 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.171 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00061: 2650831-2651830 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.171 1.0kb downstream 1.0kb downstream 27504 true AmTr_v1.0_scaffold00061: 2651831-2679334 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.171 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00061: 2678335-2679334 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.171 2.0kb upstream 2.0kb upstream 28504 true AmTr_v1.0_scaffold00061: 2649831-2678334 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.171 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00061: 2649831-2651830 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.171 2.0kb downstream 2.0kb downstream 28504 true AmTr_v1.0_scaffold00061: 2651831-2680334 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.171 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00061: 2678335-2680334 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.171 5.0kb upstream 5.0kb upstream 31504 true AmTr_v1.0_scaffold00061: 2646831-2678334 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.171 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00061: 2646831-2651830 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.171 5.0kb downstream 5.0kb downstream 31504 true AmTr_v1.0_scaffold00061: 2651831-2683334 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.171 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00061: 2678335-2683334 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.171 10.0kb upstream 10.0kb upstream 36504 true AmTr_v1.0_scaffold00061: 2641831-2678334 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.171 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00061: 2641831-2651830 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.171 10.0kb downstream 10.0kb downstream 36504 true AmTr_v1.0_scaffold00061: 2651831-2688334 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00061.171 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00061: 2678335-2688334 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122042161 5273 Angiosperm View MSA
121347251 5274 Embryophyte View MSA
123426399 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain