Gene : evm_27.TU.AmTr_v1.0_scaffold00068.20 A. trichopoda v1.0
Defline:  (1 of 1) PF08167 - rRNA processing/ribosome biogenesis (RIX1) Genomic Order:  20
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00068.20 Secondary Identifier:  ? PAC:31573414
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00068.20 0.5kb upstream 0.5kb upstream 14995 true AmTr_v1.0_scaffold00068: 487361-502355 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.20 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00068: 501856-502355 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.20 0.5kb downstream 0.5kb downstream 14995 true AmTr_v1.0_scaffold00068: 486861-501855 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.20 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00068: 486861-487360 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.20 1.0kb upstream 1.0kb upstream 15495 true AmTr_v1.0_scaffold00068: 487361-502855 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.20 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00068: 501856-502855 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.20 1.0kb downstream 1.0kb downstream 15495 true AmTr_v1.0_scaffold00068: 486361-501855 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.20 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00068: 486361-487360 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.20 2.0kb upstream 2.0kb upstream 16495 true AmTr_v1.0_scaffold00068: 487361-503855 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.20 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00068: 501856-503855 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.20 2.0kb downstream 2.0kb downstream 16495 true AmTr_v1.0_scaffold00068: 485361-501855 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.20 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00068: 485361-487360 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.20 5.0kb upstream 5.0kb upstream 19495 true AmTr_v1.0_scaffold00068: 487361-506855 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.20 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00068: 501856-506855 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.20 5.0kb downstream 5.0kb downstream 19495 true AmTr_v1.0_scaffold00068: 482361-501855 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.20 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00068: 482361-487360 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.20 10.0kb upstream 10.0kb upstream 24495 true AmTr_v1.0_scaffold00068: 487361-511855 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.20 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00068: 501856-511855 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.20 10.0kb downstream 10.0kb downstream 24495 true AmTr_v1.0_scaffold00068: 477361-501855 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00068.20 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00068: 477361-487360 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122050850 5273 Angiosperm View MSA
121349026 5274 Embryophyte View MSA
123425273 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain